BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZC05RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1650 1330 0.0 >3x_Contig1650 Length = 11257 Score = 1330 bits (671), Expect = 0.0 Identities = 772/794 (97%), Gaps = 9/794 (1%) Strand = Plus / Minus Query: 41 acagtttgttgcatcattgcagaaacggtacccatccgccacttattacaaagtgttaga 100 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1760 acagtttgttgcatcattgcagaaacggtacccatccgccacttattacaaagtgttaga 1701 Query: 101 gcaatatgtcaagtacaggcaatctcctgcgaaatatagttttgaaaatgggttaaagtt 160 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1700 gcaatatgtcaagtacaggcaatctcctgcgaaatatagttttgaaaatgggttaaagtt 1641 Query: 161 gatcttggatgccaaatctcctccaagcgatgcgaaatcgctatcaatgtgccatcgatt 220 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1640 gatcttggatgccaaatctcctccaagcgatgcgaaatcgctatcaatgtgccatcgatt 1581 Query: 221 tttgttggaattaggttttgacaccaccagtgcattggaaccttatgaaagagcaatgat 280 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1580 tttgttggaattaggttttgacaccaccagtgcattggaaccttatgaaagagcaatgat 1521 Query: 281 gaaatacggtaattcggagacatgttatgattggttcttggagtcattgagggatttaaa 340 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1520 gaaatacggtaattcggagacatgttatgattggttcttggagtcattgagggatttaaa 1461 Query: 341 ttggagacatttgagtaagagtagtttccagatgccacgagtcaatgaaaaatcgaaatc 400 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1460 ttggagacatttgagtaagagtagtttccagatgccacgagtcaatgaaaaatcgaaatc 1401 Query: 401 gagattgttccaattctggaacagtattgctactgtagtatggtttcagttggataaaga 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1400 gagattgttccaattctggaacagtattgctactgtagtatggtttcagttggataaaga 1341 Query: 461 taacattaacgaaagggaattggatcttttacctaagttgacatataaattgacaagcga 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1340 taacattaacgaaagggaattggatcttttacctaagttgacatataaattgacaagcga 1281 Query: 521 tttgaaaccttttgagaatgagncagagttgatcgttttctgtaaagtttgtgaattgtt 580 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 1280 tttgaaaccttttgagaatgagcaagagttgatcgttttctgtaaagtttgtgaattgtt 1221 Query: 581 tgaggataaatcacaggagatcgtggacgagatcctcaag-tttgggaacatgggtac-t 638 |||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| | Sbjct: 1220 tgaggataaatcacaggagatcgtggacgagatcctcaagttttggaaacat-ggtactt 1162 Query: 639 acttagacctttatttgaaaaacttccttatgggccattttggtgaaattagacgattat 698 ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 1161 acttagacctttatttgaaaaacttccttatgggcca-tttggtgaaattagacgatta- 1104 Query: 699 taaactcatttgggaacatggaatctcgttattggataaccttgacgattatgggtattt 758 ||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 1103 taaactcatttggaaacatggaatctcgttattgaataaccttgacgattat-ggtattt 1045 Query: 759 tgcaaaagattatttatgcagttttcaaacttgggccagtcatttcgataagttttttgg 818 ||||||||||||| ||||| || ||||||| ||| ||||| |||||| || || |||| Sbjct: 1044 tgcaaaagattatagatgcaagttacaaactt-ggcaagtca-ttcgatgag-ttattgg 988 Query: 819 aagttttggaaatc 832 |||||||||||||| Sbjct: 987 aagttttggaaatc 974 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7477 Number of Sequences: 1807 Number of extensions: 7477 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)