BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZC05RM1.SCF screened BAC_end
         (928 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1650                                                        1330   0.0  

>3x_Contig1650 
          Length = 11257

 Score = 1330 bits (671), Expect = 0.0
 Identities = 772/794 (97%), Gaps = 9/794 (1%)
 Strand = Plus / Minus

                                                                        
Query: 41   acagtttgttgcatcattgcagaaacggtacccatccgccacttattacaaagtgttaga 100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 acagtttgttgcatcattgcagaaacggtacccatccgccacttattacaaagtgttaga 1701

                                                                        
Query: 101  gcaatatgtcaagtacaggcaatctcctgcgaaatatagttttgaaaatgggttaaagtt 160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1700 gcaatatgtcaagtacaggcaatctcctgcgaaatatagttttgaaaatgggttaaagtt 1641

                                                                        
Query: 161  gatcttggatgccaaatctcctccaagcgatgcgaaatcgctatcaatgtgccatcgatt 220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 gatcttggatgccaaatctcctccaagcgatgcgaaatcgctatcaatgtgccatcgatt 1581

                                                                        
Query: 221  tttgttggaattaggttttgacaccaccagtgcattggaaccttatgaaagagcaatgat 280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1580 tttgttggaattaggttttgacaccaccagtgcattggaaccttatgaaagagcaatgat 1521

                                                                        
Query: 281  gaaatacggtaattcggagacatgttatgattggttcttggagtcattgagggatttaaa 340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1520 gaaatacggtaattcggagacatgttatgattggttcttggagtcattgagggatttaaa 1461

                                                                        
Query: 341  ttggagacatttgagtaagagtagtttccagatgccacgagtcaatgaaaaatcgaaatc 400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1460 ttggagacatttgagtaagagtagtttccagatgccacgagtcaatgaaaaatcgaaatc 1401

                                                                        
Query: 401  gagattgttccaattctggaacagtattgctactgtagtatggtttcagttggataaaga 460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1400 gagattgttccaattctggaacagtattgctactgtagtatggtttcagttggataaaga 1341

                                                                        
Query: 461  taacattaacgaaagggaattggatcttttacctaagttgacatataaattgacaagcga 520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1340 taacattaacgaaagggaattggatcttttacctaagttgacatataaattgacaagcga 1281

                                                                        
Query: 521  tttgaaaccttttgagaatgagncagagttgatcgttttctgtaaagtttgtgaattgtt 580
            ||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||
Sbjct: 1280 tttgaaaccttttgagaatgagcaagagttgatcgttttctgtaaagtttgtgaattgtt 1221

                                                                        
Query: 581  tgaggataaatcacaggagatcgtggacgagatcctcaag-tttgggaacatgggtac-t 638
            |||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 1220 tgaggataaatcacaggagatcgtggacgagatcctcaagttttggaaacat-ggtactt 1162

                                                                        
Query: 639  acttagacctttatttgaaaaacttccttatgggccattttggtgaaattagacgattat 698
            ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| 
Sbjct: 1161 acttagacctttatttgaaaaacttccttatgggcca-tttggtgaaattagacgatta- 1104

                                                                        
Query: 699  taaactcatttgggaacatggaatctcgttattggataaccttgacgattatgggtattt 758
            ||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 1103 taaactcatttggaaacatggaatctcgttattgaataaccttgacgattat-ggtattt 1045

                                                                        
Query: 759  tgcaaaagattatttatgcagttttcaaacttgggccagtcatttcgataagttttttgg 818
            |||||||||||||  |||||  || ||||||| ||| ||||| |||||| || || ||||
Sbjct: 1044 tgcaaaagattatagatgcaagttacaaactt-ggcaagtca-ttcgatgag-ttattgg 988

                          
Query: 819  aagttttggaaatc 832
            ||||||||||||||
Sbjct: 987  aagttttggaaatc 974


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7477
Number of Sequences: 1807
Number of extensions: 7477
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 928
length of database: 10,358,551
effective HSP length: 16
effective length of query: 912
effective length of database: 10,329,639
effective search space: 9420630768
effective search space used: 9420630768
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)