BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZC06RM1.SCF screened BAC_end
         (932 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1602                                                        1348   0.0  

>3x_Contig1602 
          Length = 12694

 Score = 1348 bits (680), Expect = 0.0
 Identities = 807/841 (95%), Gaps = 7/841 (0%)
 Strand = Plus / Minus

                                                                        
Query: 46   agagagttcttgcagcagtagccaacaagccattcttgattgatgcctgagaaacgtcca 105
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8687 agagagttcttgcagcagtagccaacaagccattcttgattgatgcctgagaaacgtcca 8628

                                                                        
Query: 106  aaatgaaagcgtaagtggatggtggtggtggtctgacagcgtattctttatgagcaacga 165
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8627 aaatgaaagcgtaagtggatggtggtggtggtctgacagcgtattctttaggagcaacga 8568

                                                                        
Query: 166  aatccacaacagaatggttgaattcgggtctctcgtaacggttaccattcatatcaattg 225
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8567 aatccacaacagaatggttgaattcgggtctctcgtaacggttaccattcatatcaattg 8508

                                                                        
Query: 226  cttgagggaagttgttcgccaagttacagaagttacatctccaacgtaaaccattctcga 285
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8507 cttgagggaagttgttcgccaagttacagaagttacatctccaacgtaaaccattctcga 8448

                                                                        
Query: 286  ttacttgtacgaaggggttcaagtaggcacgacaacgtctacaacgaaccacaacaccgt 345
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8447 ttacttgtacgaaggggttcaagtaggcacgacaacgtctacaacgaaccacaacaccgt 8388

                                                                        
Query: 346  cttcgctagttggcactggacattcagagtcggttaacttagtgtatggtctgataacca 405
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8387 cttcgctagttggcactggacattcagagtcggttaacttagtgtatggtctgataacca 8328

                                                                        
Query: 406  tagctaatggtagtttcgattttttcagtaaagaattgttttttggaacggcgttcaaag 465
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8327 tagctaatggtagtttcgattttttcagtaaagaattgttttttggaacggcgttcaaag 8268

                                                                        
Query: 466  tgcaccttaaatggtcagaacaattgttaactgtatcgttaggaacaatcatcttctctg 525
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8267 tgcaccttaaatggtcagaacaattgttaactgtatcgttaggaacaatcatcttctctg 8208

                                                                        
Query: 526  gatggagcatcaacggtggtggaggcaaagacaagtcagtgattggatggatgc-attct 584
            || |||||||||||||||||||||||||||||||||||||||||||| ||| || |||||
Sbjct: 8207 gagggagcatcaacggtggtggaggcaaagacaagtcagtgattgga-ggaggcaattct 8149

                                                                        
Query: 585  tggaacatatcaactgggtacaattgattcattggtttacccacagccattcctactnct 644
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 8148 tggaacaaatcaactgggtacaattgattcattggtttacccacagccattcctactcct 8089

                                                                        
Query: 645  ggntgntgatattgtggttgctgctgctgttgtccgtacgtttg-ccatatcgctgttgc 703
            || || |||||||||||||||||||||||||||||||||||||| |||||  ||||||||
Sbjct: 8088 ggttgttgatattgtggttgctgctgctgttgtccgtacgtttgcccatacggctgttgc 8029

                                                                        
Query: 704  attggctgctgatactgctgctgaacaccgg-tatgttattcgcgccgtaaccactggtc 762
            ||||||||||||||||||||||||||||||| ||||||||  |||||||| |||||| ||
Sbjct: 8028 attggctgctgatactgctgctgaacaccggatatgttatcggcgccgtagccactgttc 7969

                                                                        
Query: 763  attgcctgcccctattgaggagcccca-cgtattgtgggttgttgcacccggggtttcaa 821
            |||| ||| || ||||||||||||||| ||||| || |||||||||| |||||||| || 
Sbjct: 7968 attggctggccatattgaggagccccaccgtatggt-ggttgttgca-ccggggttccag 7911

                                                                        
Query: 822  cttgctggaatgcctttggatcaccccccggaacgttgggtaattgcttattaccaatgc 881
            |||||||||||||  | |||||| || | ||||||||| |||||||| ||||||||||||
Sbjct: 7910 cttgctggaatgcagtaggatcaaccacaggaacgttgtgtaattgcatattaccaatgc 7851

             
Query: 882  c 882
            |
Sbjct: 7850 c 7850


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5962
Number of Sequences: 1807
Number of extensions: 5962
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)