BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZC06RM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1602 1348 0.0 >3x_Contig1602 Length = 12694 Score = 1348 bits (680), Expect = 0.0 Identities = 807/841 (95%), Gaps = 7/841 (0%) Strand = Plus / Minus Query: 46 agagagttcttgcagcagtagccaacaagccattcttgattgatgcctgagaaacgtcca 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8687 agagagttcttgcagcagtagccaacaagccattcttgattgatgcctgagaaacgtcca 8628 Query: 106 aaatgaaagcgtaagtggatggtggtggtggtctgacagcgtattctttatgagcaacga 165 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 8627 aaatgaaagcgtaagtggatggtggtggtggtctgacagcgtattctttaggagcaacga 8568 Query: 166 aatccacaacagaatggttgaattcgggtctctcgtaacggttaccattcatatcaattg 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8567 aatccacaacagaatggttgaattcgggtctctcgtaacggttaccattcatatcaattg 8508 Query: 226 cttgagggaagttgttcgccaagttacagaagttacatctccaacgtaaaccattctcga 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8507 cttgagggaagttgttcgccaagttacagaagttacatctccaacgtaaaccattctcga 8448 Query: 286 ttacttgtacgaaggggttcaagtaggcacgacaacgtctacaacgaaccacaacaccgt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8447 ttacttgtacgaaggggttcaagtaggcacgacaacgtctacaacgaaccacaacaccgt 8388 Query: 346 cttcgctagttggcactggacattcagagtcggttaacttagtgtatggtctgataacca 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8387 cttcgctagttggcactggacattcagagtcggttaacttagtgtatggtctgataacca 8328 Query: 406 tagctaatggtagtttcgattttttcagtaaagaattgttttttggaacggcgttcaaag 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8327 tagctaatggtagtttcgattttttcagtaaagaattgttttttggaacggcgttcaaag 8268 Query: 466 tgcaccttaaatggtcagaacaattgttaactgtatcgttaggaacaatcatcttctctg 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 8267 tgcaccttaaatggtcagaacaattgttaactgtatcgttaggaacaatcatcttctctg 8208 Query: 526 gatggagcatcaacggtggtggaggcaaagacaagtcagtgattggatggatgc-attct 584 || |||||||||||||||||||||||||||||||||||||||||||| ||| || ||||| Sbjct: 8207 gagggagcatcaacggtggtggaggcaaagacaagtcagtgattgga-ggaggcaattct 8149 Query: 585 tggaacatatcaactgggtacaattgattcattggtttacccacagccattcctactnct 644 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 8148 tggaacaaatcaactgggtacaattgattcattggtttacccacagccattcctactcct 8089 Query: 645 ggntgntgatattgtggttgctgctgctgttgtccgtacgtttg-ccatatcgctgttgc 703 || || |||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 8088 ggttgttgatattgtggttgctgctgctgttgtccgtacgtttgcccatacggctgttgc 8029 Query: 704 attggctgctgatactgctgctgaacaccgg-tatgttattcgcgccgtaaccactggtc 762 ||||||||||||||||||||||||||||||| |||||||| |||||||| |||||| || Sbjct: 8028 attggctgctgatactgctgctgaacaccggatatgttatcggcgccgtagccactgttc 7969 Query: 763 attgcctgcccctattgaggagcccca-cgtattgtgggttgttgcacccggggtttcaa 821 |||| ||| || ||||||||||||||| ||||| || |||||||||| |||||||| || Sbjct: 7968 attggctggccatattgaggagccccaccgtatggt-ggttgttgca-ccggggttccag 7911 Query: 822 cttgctggaatgcctttggatcaccccccggaacgttgggtaattgcttattaccaatgc 881 ||||||||||||| | |||||| || | ||||||||| |||||||| |||||||||||| Sbjct: 7910 cttgctggaatgcagtaggatcaaccacaggaacgttgtgtaattgcatattaccaatgc 7851 Query: 882 c 882 | Sbjct: 7850 c 7850 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5962 Number of Sequences: 1807 Number of extensions: 5962 Number of successful extensions: 67 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)