BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZC10FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1533 934 0.0 >3x_Contig1533 Length = 11082 Score = 934 bits (471), Expect = 0.0 Identities = 707/762 (92%), Gaps = 18/762 (2%) Strand = Plus / Plus Query: 85 agatgatttttttgatattttgctaacacgtctactttgaggcaggctttttcttggttg 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6082 agatgatttttttgatattttgctaacacgtctactttgaggcaggctttttcttggttg 6141 Query: 145 gatgttgactttcatttctgactcctccacgttattcttcacaaattcttcgactattgt 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6142 gatgttgactttcatttctgactcctccacgttattcttcacaaattcttcgactattgt 6201 Query: 205 gagaagttttt-cagttgcttctacctgaccagagtttacactattatcaatcatagatt 263 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6202 gagaagttttttcagttgcttctacctgaccagagtttacactattatcaatcatagatt 6261 Query: 264 tgatccaactactcccagtccaatccacccagtaggaaatttttaatacacaactagtat 323 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6262 tgatccaactactcccagtccaatccacccagtaggaaatttttaatacacaactagtat 6321 Query: 324 tgtccttccagcgatacatgtatctcgttttgacgctaaagctattaccgcttggtacat 383 |||||||||||||| | |||||||||||||||||| |||||||||||||||||||||||| Sbjct: 6322 tgtccttccagcgagatatgtatctcgttttgacgttaaagctattaccgcttggtacat 6381 Query: 384 ctggtgtcttagtagtgtttactatgttgatatagttgtcatatgcacagtataatatat 443 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 6382 ctggtgtcttagtagtgtttactatgttgatatagttgtcatatgcacagaataatatat 6441 Query: 444 gttctgataccaaacattttgttgattttggcccaacaggatagttcaaggctttagcat 503 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 6442 gttctgataccaaacattttgttgattttggcccaacaggaaagttcaaggctttagcat 6501 Query: 504 angtatatttacgatagtgctgtcctttcgggttaacttggtcaaaa-gaagtatatcgg 562 | ||||||||||||||||||||||||| |||||||||||||||||| || ||||||||| Sbjct: 6502 aggtatatttacgatagtgctgtccttcggggttaacttggtcaaaaggaggtatatcgg 6561 Query: 563 -acattgacttgaa-tttgcgc-ttcaagaatt-caagatgagatctgggc-ttcctcgc 617 ||||||||||||| ||||||| |||||||||| ||||||||||||||||| |||||||| Sbjct: 6562 aacattgacttgaattttgcgctttcaagaattccaagatgagatctgggcattcctcgc 6621 Query: 618 tgaacat-agttggtaaactaaacc-ggaagaacattttattct-attttgcaag-acag 673 ||||||| ||||||||||||| ||| ||| || ||||| ||||| ||| |||||| |||| Sbjct: 6622 tgaacataagttggtaaactagacctggaggagcatttaattctaattctgcaagaacag 6681 Query: 674 tct-tttggtttcctccggattgtccattaatttgggagcccttgaa-taataa-gcccc 730 ||| |||| ||||||||||||||| ||| |||| || || ||||||| |||||| |||| Sbjct: 6682 tctctttgttttcctccggattgtacatgaattcggtag-ccttgaagtaataaggccca 6740 Query: 731 tcctattgaaattgggattttttttttaaattggaaaacgcgaacaacagaatttttcct 790 || || ||||||| ||| ||| || || |||| | |||||||| ||||| ||||||||| Sbjct: 6741 tcataatgaaatttgga-tttcttcttcaatttgtaaacgcgacgaacag-atttttcct 6798 Query: 791 attaaatactggcaatcggccttttcattggaataataatcg 832 ||| |||||||||| |||| ||||| | ||||||||||| Sbjct: 6799 cataatcactggcaatc-gcctcttcatcgtaataataatcg 6839 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8029 Number of Sequences: 1807 Number of extensions: 8029 Number of successful extensions: 73 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)