BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZC11RM1.SCF screened BAC_end (892 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1757 1318 0.0 >3x_Contig1757 Length = 24754 Score = 1318 bits (665), Expect = 0.0 Identities = 713/724 (98%), Gaps = 4/724 (0%) Strand = Plus / Plus Query: 43 gcttgtattttgcaaaacccttcttt-aaaaatgcttccgagcaagaacaaatttctgct 101 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 20239 gcttgtattttgcaaaacccttctttcaaaaatgcttccgagcaagaacaaatttctgct 20298 Query: 102 ttaattgctattctcaactctgatcctcagacagcaatgccgcatgcggctcctgttgcc 161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20299 ttaattgctattctcaactctgatcctcagacagcaatgccgcatgcggctcctgttgcc 20358 Query: 162 acttctactacaacggcagcatccgaatcaaaaggcaagaacgttcgtttcccacttcca 221 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 20359 acttctactacaacggcagcatccgaatcaaaaggcaagaacgttcgtttcccacgtcca 20418 Query: 222 aacatgtcccagccaatgtctgccgaggagaaggagagatattcagaatatttaaacggt 281 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20419 aacatgtcccagccaatgtctgccgaggagaaggagagatattcagaatatttaaacggt 20478 Query: 282 gagactaagattacagagattcaatcttttccaccaaaatcaagattgttcattggtaac 341 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20479 gagactaagattacagagattcaatcttttccaccaaaatcaagattgttcattggtaac 20538 Query: 342 ttacctctgaaaaacgttacgaaagaggacttattccgtatattctcaccttatggtcat 401 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20539 ttacctctgaaaaacgttacgaaagaggacttattccgtatattctcaccttatggtcat 20598 Query: 402 atttttcaaatcaacatcaagaatgcttttggtttcattcagtacgataaccaaagatcc 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20599 atttttcaaatcaacatcaagaatgcttttggtttcattcagtacgataaccaaagatcc 20658 Query: 462 gtgctagatgccattgaatgtgaatctgaggaaatgaatttcggtaagaagctaatctta 521 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20659 gtgctagatgccattgaatgtgaatctgaggaaatgaatttcggtaagaagctaatctta 20718 Query: 522 gaagtttcaagttctaatgctagaccacaatttgaccatggtgaccacggttctaatacc 581 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20719 gaagtttcaagttctaatgctagaccacaatttgaccatggtgaccacggttctaatacc 20778 Query: 582 agttccacctacgtcacttncaagc-agagtaactacgataacgatgaaaacgacgatga 640 ||||||||||||||||||| ||||| |||| |||||||||||||| |||||||||||||| Sbjct: 20779 agttccacctacgtcactt-caagcaagagaaactacgataacgaggaaaacgacgatga 20837 Query: 641 agacatgtacagcgataatcattancagaagtcaaagaagcgtactccacaatgtctaat 700 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 20838 agacatgtacagcgataatcattacaagaagtcaaagaagcgtactccacaatgtctaat 20897 Query: 701 atacgtcaagattgccgcagatcgtacatatgcgtacagtgtttttacc-atttaagcaa 759 ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 20898 atacgtcaagaaggccgcagatcgtacatatgcgtacagtgtttttaccaatttaagcaa 20957 Query: 760 aaaa 763 |||| Sbjct: 20958 aaaa 20961 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7179 Number of Sequences: 1807 Number of extensions: 7179 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 892 length of database: 10,358,551 effective HSP length: 16 effective length of query: 876 effective length of database: 10,329,639 effective search space: 9048763764 effective search space used: 9048763764 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)