BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZC11RM1.SCF screened BAC_end
         (892 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1757                                                        1318   0.0  

>3x_Contig1757 
          Length = 24754

 Score = 1318 bits (665), Expect = 0.0
 Identities = 713/724 (98%), Gaps = 4/724 (0%)
 Strand = Plus / Plus

                                                                         
Query: 43    gcttgtattttgcaaaacccttcttt-aaaaatgcttccgagcaagaacaaatttctgct 101
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 20239 gcttgtattttgcaaaacccttctttcaaaaatgcttccgagcaagaacaaatttctgct 20298

                                                                         
Query: 102   ttaattgctattctcaactctgatcctcagacagcaatgccgcatgcggctcctgttgcc 161
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20299 ttaattgctattctcaactctgatcctcagacagcaatgccgcatgcggctcctgttgcc 20358

                                                                         
Query: 162   acttctactacaacggcagcatccgaatcaaaaggcaagaacgttcgtttcccacttcca 221
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 20359 acttctactacaacggcagcatccgaatcaaaaggcaagaacgttcgtttcccacgtcca 20418

                                                                         
Query: 222   aacatgtcccagccaatgtctgccgaggagaaggagagatattcagaatatttaaacggt 281
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20419 aacatgtcccagccaatgtctgccgaggagaaggagagatattcagaatatttaaacggt 20478

                                                                         
Query: 282   gagactaagattacagagattcaatcttttccaccaaaatcaagattgttcattggtaac 341
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20479 gagactaagattacagagattcaatcttttccaccaaaatcaagattgttcattggtaac 20538

                                                                         
Query: 342   ttacctctgaaaaacgttacgaaagaggacttattccgtatattctcaccttatggtcat 401
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20539 ttacctctgaaaaacgttacgaaagaggacttattccgtatattctcaccttatggtcat 20598

                                                                         
Query: 402   atttttcaaatcaacatcaagaatgcttttggtttcattcagtacgataaccaaagatcc 461
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20599 atttttcaaatcaacatcaagaatgcttttggtttcattcagtacgataaccaaagatcc 20658

                                                                         
Query: 462   gtgctagatgccattgaatgtgaatctgaggaaatgaatttcggtaagaagctaatctta 521
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20659 gtgctagatgccattgaatgtgaatctgaggaaatgaatttcggtaagaagctaatctta 20718

                                                                         
Query: 522   gaagtttcaagttctaatgctagaccacaatttgaccatggtgaccacggttctaatacc 581
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20719 gaagtttcaagttctaatgctagaccacaatttgaccatggtgaccacggttctaatacc 20778

                                                                         
Query: 582   agttccacctacgtcacttncaagc-agagtaactacgataacgatgaaaacgacgatga 640
             ||||||||||||||||||| ||||| |||| |||||||||||||| ||||||||||||||
Sbjct: 20779 agttccacctacgtcactt-caagcaagagaaactacgataacgaggaaaacgacgatga 20837

                                                                         
Query: 641   agacatgtacagcgataatcattancagaagtcaaagaagcgtactccacaatgtctaat 700
             ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||
Sbjct: 20838 agacatgtacagcgataatcattacaagaagtcaaagaagcgtactccacaatgtctaat 20897

                                                                         
Query: 701   atacgtcaagattgccgcagatcgtacatatgcgtacagtgtttttacc-atttaagcaa 759
             |||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 20898 atacgtcaagaaggccgcagatcgtacatatgcgtacagtgtttttaccaatttaagcaa 20957

                 
Query: 760   aaaa 763
             ||||
Sbjct: 20958 aaaa 20961


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7179
Number of Sequences: 1807
Number of extensions: 7179
Number of successful extensions: 43
Number of sequences better than 1.0e-20: 1
length of query: 892
length of database: 10,358,551
effective HSP length: 16
effective length of query: 876
effective length of database: 10,329,639
effective search space: 9048763764
effective search space used: 9048763764
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)