BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZC12FM1.SCF screened BAC_end (951 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1027 1245 0.0 3x_Contig1600 163 8e-40 >3x_Contig1027 Length = 4522 Score = 1245 bits (628), Expect = 0.0 Identities = 660/668 (98%), Gaps = 2/668 (0%) Strand = Plus / Plus Query: 88 tgcttcaatgtcaacattgtaacattcaggaagctctgagttctccataagtctgtttgt 147 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3846 tgcttcaatgtcaacattgtaacattcaggaagctctgagttctccataagtctgtttgt 3905 Query: 148 tataccgttttccatctgtgttctgatcctttgagcatccaactcctggaatacttttat 207 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3906 tataccgttttccatctgtgttctgatcctttgagcatccaactcctggaatacttttat 3965 Query: 208 ttcattttcgtttctcgccaagatttcattgagttcgttatcatccaactgctcttcttc 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3966 ttcattttcgtttctcgccaagatttcattgagttcgttatcatccaactgctcttcttc 4025 Query: 268 ttcaatgcctaactcacgtcttttcttttcctcttcctcagcttctagtaacgatctcaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4026 ttcaatgcctaactcacgtcttttcttttcctcttcctcagcttctagtaacgatctcaa 4085 Query: 328 taatgcctcttgttcttcagctgttgatttgttatcaaacttacctgcttgaataacttt 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4086 taatgcctcttgttcttcagctgttgatttgttatcaaacttacctgcttgaataacttt 4145 Query: 388 tccgtcaatgtccaatttggcatgcgccttatcaagaattgcttcttccactgaattgtc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4146 tccgtcaatgtccaatttggcatgcgccttatcaagaattgcttcttccactgaattgtc 4205 Query: 448 tgtaattaatctaagaatacgcacttcattcttttgaccgattctatgagctctgtcttg 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4206 tgtaattaatctaagaatacgcacttcattcttttgaccgattctatgagctctgtcttg 4265 Query: 508 ggcctgtaaatcctggtgaggattccaatcagtatcaaaaatgataacggtatctgcagt 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4266 ggcctgtaaatcctggtgaggattccaatcagtatcaaaaatgataacggtatctgcagt 4325 Query: 568 ttgcaaatttatacctaaaccaccagctcttgtagataaaaggaaacagatattatcaga 627 ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 4326 ttgcaaatttaaacctaaaccaccagctcttgtagataaaaggaaacagaaataatcaga 4385 Query: 628 gtttggggcattgaaagtgtttaattatgcagtacgatcatcagatttagtatgaccggc 687 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct: 4386 gtttggggcattgaaagtgtttaataatgcagtacgatcatcagatttagtatgacc-gt 4444 Query: 688 ctaatctt-agtatttcatgtcaagatatctcaagaaatctttcatgatatccataactt 746 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 4445 ctaatcttaagtatttcatgtcaagatatctcaagaaatcttccatgatatccataactt 4504 Query: 747 gcgtcatt 754 |||||||| Sbjct: 4505 gcgtcatt 4512 >3x_Contig1600 Length = 9359 Score = 163 bits (82), Expect = 8e-40 Identities = 225/270 (83%), Gaps = 2/270 (0%) Strand = Plus / Minus Query: 335 tcttgttcttcagctgttgatttgttatcaaacttacctgcttgaataacttttccgtca 394 |||||||||||||| || ||||| || ||||| ||||| |||||||||||||| || ||| Sbjct: 1740 tcttgttcttcagcagtagatttattgtcaaatttaccggcttgaataactttaccatca 1681 Query: 395 atgtccaatttg-gcatgcgccttatcaagaattgcttcttccactgaattgtctgtaat 453 || |||||||| |||| || | || ||||| ||||||| || |||| | ||| || Sbjct: 1680 atatccaatttttgcatt-gctctctctagaataacttcttcgacggaatcggttgttat 1622 Query: 454 taatctaagaatacgcacttcattcttttgaccgattctatgagctctgtcttgggcctg 513 |||||| | |||||| ||||| ||||| || || ||||| |||||||| |||||||| || Sbjct: 1621 taatctcaaaatacgaacttcgttcttctgcccaattctgtgagctctatcttgggcttg 1562 Query: 514 taaatcctggtgaggattccaatcagtatcaaaaatgataacggtatctgcagtttgcaa 573 ||||||||| |||||||||||||||||||| ||||| || || ||||| ||||| ||||| Sbjct: 1561 taaatcctgatgaggattccaatcagtatcgaaaataatgaccgtatcagcagtctgcaa 1502 Query: 574 atttatacctaaaccaccagctcttgtaga 603 ||||| |||||| ||||||||||| ||||| Sbjct: 1501 atttagacctaacccaccagctctggtaga 1472 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9078 Number of Sequences: 1807 Number of extensions: 9078 Number of successful extensions: 68 Number of sequences better than 1.0e-20: 2 length of query: 951 length of database: 10,358,551 effective HSP length: 16 effective length of query: 935 effective length of database: 10,329,639 effective search space: 9658212465 effective search space used: 9658212465 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)