BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZD09RM1.SCF screened BAC_end (922 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1698 1150 0.0 >3x_Contig1698 Length = 21001 Score = 1150 bits (580), Expect = 0.0 Identities = 649/663 (97%), Gaps = 7/663 (1%) Strand = Plus / Plus Query: 43 gcttaaccatccagttccgacctataattagatgcgaattcctagattccagaagggctg 102 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 18409 gcttaaccatccagttccgacctaaaattagatgcgaattcctagattccagaagggctg 18468 Query: 103 tccatttatcttgagcccagacggcccatgctaatcgccttcgtagtccacgttcccagc 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18469 tccatttatcttgagcccagacggcccatgctaatcgccttcgtagtccacgttcccagc 18528 Query: 163 gaggtaatctccagtcttgacaatcaacaccgaggccaagttcctctgacaaagcaacaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18529 gaggtaatctccagtcttgacaatcaacaccgaggccaagttcctctgacaaagcaacaa 18588 Query: 223 cttccgaacatagtacccaattgttgggacattcactacgacaatgcaaaattagtaaac 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18589 cttccgaacatagtacccaattgttgggacattcactacgacaatgcaaaattagtaaac 18648 Query: 283 ctgcttggacaatgcttaatttgggtctttcaaacacctcgtagaaagtttttaatgcaa 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18649 ctgcttggacaatgcttaatttgggtctttcaaacacctcgtagaaagtttttaatgcaa 18708 Query: 343 tatcattcaattgattcgcaacatctggtttaggaaaaccaatcaattgcgggtggaaat 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 18709 tatcattcaattgattcgcaacatctggtttaggaaaaccaatcaattgcgggt-gaaat 18767 Query: 403 cccaccattgtaaagctagggaataaatggatgcaagaattggcgccgtgagttcacgat 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18768 cccaccattgtaaagctagggaataaatggatgcaagaattggcgccgtgagttcacgat 18827 Query: 463 aagatcttgagtacttctccaaaaatactcgttcgtgtagaatgggaaagtaaggatgaa 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18828 aagatcttgagtacttctccaaaaatactcgttcgtgtagaatgggaaagtaaggatgaa 18887 Query: 523 tcagtttaaagatnattttcaccaatattttaccatgaggatgcactagtttttccacta 582 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 18888 tcagtttaaagaaaatttcaaccaatattttaccatgaggatgcactagtttttccacta 18947 Query: 583 aatctatatcacgttcttgcttcaagt-aagttcttga-taaaatcgtctctt-agatga 639 ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||| Sbjct: 18948 aatctatatcacgttcttgcttcaagtaaagttcttgattaaaatcgtctcttaagatga 19007 Query: 640 actgtgcatt-ggagattcctggcgta-tgcgacattttttgataattgcac-tgctcaa 696 |||||||||| |||||| ||| ||||| |||||||||||||||||||||||| ||||||| Sbjct: 19008 actgtgcattgggagataccttgcgtagtgcgacattttttgataattgcacttgctcaa 19067 Query: 697 tct 699 ||| Sbjct: 19068 tct 19070 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5686 Number of Sequences: 1807 Number of extensions: 5686 Number of successful extensions: 30 Number of sequences better than 1.0e-20: 1 length of query: 922 length of database: 10,358,551 effective HSP length: 16 effective length of query: 906 effective length of database: 10,329,639 effective search space: 9358652934 effective search space used: 9358652934 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)