BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZD12FM1.SCF screened BAC_end (963 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1356 1213 0.0 >3x_Contig1356 Length = 8043 Score = 1213 bits (612), Expect = 0.0 Identities = 691/713 (96%), Gaps = 4/713 (0%) Strand = Plus / Plus Query: 98 tccactgtgagagtactaactctcgcactgattccatcgaattgcagattgggaaccaga 157 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4833 tccactgtgagagtactaactctcgcactgattccatcgaattgcagattgggaaccaga 4892 Query: 158 ttcctcgattttccagtgctaaagaaaatcagtggaattggtcgcctagatgttttcctt 217 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4893 ttcctcgattttccagtgctaaagaaaatcagtggaattggtcgcctagatgttttcctt 4952 Query: 218 tttcggacgatttttttataagatatggatggtaagaaaacaacaaagtgcggtgtacat 277 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4953 tttcggacgaaaaacttaaaagatatggatggtaagaaaacaacaaagtgcggtgtacat 5012 Query: 278 atagtaataggatttaaacgcatttttatatgtggtgtattgtggtaacagtcccttatt 337 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5013 atagtaataggatttaaacgcatttttatatgtggtgtattgtggtaacagtcccttatt 5072 Query: 338 ttcattttgagtctcaccacttactaattttttcgcaccgaacttacaatctgtaggcag 397 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5073 ttcattttgagtctcaccacttactaattttttcgcaccgaacttacaatctgtaggcag 5132 Query: 398 actcgccaatttcctcctacgctccggttccactccctccctgttctccaccctgttggg 457 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5133 actcgccaatttcctcctacgctccggttccactccctccctgttctccaccctgttggg 5192 Query: 458 tacacggagtgcaagcttactggcctgcctaccggtagcaaagcttcctgcctaacctta 517 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5193 tacacggagtgcaagcttactggcctgcctaccggtagcaaagcttcctgcctaacctta 5252 Query: 518 ccgtctcccccgtccaacccatgcttccagctgggaatagggcccatcttctcctccgct 577 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5253 ccgtctcccccgtccaacccatgcttccagctgggaatagggcccatcttctcctccgct 5312 Query: 578 attgtctctgcgaacagcttggttccctagtatgggtcctaccattg-atgattnntttg 636 ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 5313 attgtctctgcgaacagcttggttccctagtatgggtcctaccattgaatgatttttttg 5372 Query: 637 gtgaacttttcag-atcattgcgaagttttgagatatcgacctttttcaccaatacgaac 695 ||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 5373 gtgaacttttcagaatcattgcgaagtttgaggatatcgacctttttcaccaatacgaac 5432 Query: 696 aatctcagtttggaattaattgctttttttgatagttacagcttttgttgatttcacatt 755 ||||||||||| ||||| | ||||||||||||||||||||||||||||||||||||||| Sbjct: 5433 aatctcagttt-gaatttaatgctttttttgatagttacagcttttgttgatttcacata 5491 Query: 756 nagattttagttgatattgcaattcatttaaccgtattcttttattaatagaa 808 |||||||||||||||||||||||||||| | ||||||||||| |||||||| Sbjct: 5492 gagattttagttgatattgcaattcatttca-cgtattctttttataatagaa 5543 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6555 Number of Sequences: 1807 Number of extensions: 6555 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 963 length of database: 10,358,551 effective HSP length: 16 effective length of query: 947 effective length of database: 10,329,639 effective search space: 9782168133 effective search space used: 9782168133 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)