BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZE01RM1.SCF screened BAC_end
         (932 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1507                                                        1429   0.0  

>3x_Contig1507 
          Length = 11359

 Score = 1429 bits (721), Expect = 0.0
 Identities = 822/843 (97%), Gaps = 11/843 (1%)
 Strand = Plus / Plus

                                                                        
Query: 47   attgttctgaatgtttcaaatgttgcaaatgtggtgaaaaaattaacgatcttaggtatg 106
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7561 attgttctgaatgtttcaaatgttgcaaatgtggtgaaaaaattaacgatcttaggtatg 7620

                                                                        
Query: 107  caaagacaaagaaagggttattctgtataacttgtcatgaacgacttttagccaggaaga 166
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7621 caaagacaaagaaagggttattctgtataacttgtcatgaacgacttttagccaggaaga 7680

                                                                        
Query: 167  agtaccatgaggagaagaagcgaagactaaagaaacagttgccgatcgttccatcgccca 226
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7681 agtaccatgaggagaagaagcgaagactaaagaaacagttgccgatcgttccatcgccca 7740

                                                                        
Query: 227  aattaccagactcctcttcttcacttgacccgcagaagatggagttcagcagcgtggaga 286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7741 aattaccagactcctcttcttcacttgacccgcagaagatggagttcagcagcgtggaga 7800

                                                                        
Query: 287  ctgcgaataatagtaatttgaactcgagcttagatccggggctcgaactcacgccagaaa 346
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7801 ctgcgaataatagtaatttgaactcgagcttagatccggggctcgaactcacgccagaaa 7860

                                                                        
Query: 347  gcaacccttattccgtagtttcatcaattgcaccggataggtctagttcacgacctgcaa 406
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7861 gcaacccttattccgtagtttcatcaattgcaccggataggtctagttcacgacctgcaa 7920

                                                                        
Query: 407  ctgcagagttgttgcagcataaccaccagcatgcagataataattacagtgaggatgtaa 466
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7921 ctgcagagttgttgcagcataaccaccagcatgcagataataattacagtgaggatgtaa 7980

                                                                        
Query: 467  taaaccaactgaaccaatcaccctctccacctccacaaaagtccattaccgctccaatag 526
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7981 taaaccaactgaaccaatcaccctctccacctccacaaaagtccattaccgctccaatag 8040

                                                                        
Query: 527  atttctcaaagaaggatgctatagttaagtcaagctcgaatagtgtcattgcacaattct 586
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8041 atttctcaaagaaggatgctatagttaagtcaagctcgaatagtgtcattgcacaattct 8100

                                                                        
Query: 587  tagatgatgagtaccatgatgacgacggtaatgtatcaatttcaacacaacacaaggatt 646
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8101 tagatgatgagtaccatgatgacgacggtaatgtatcaatttcaacacaacacaaggatt 8160

                                                                        
Query: 647  cacatttagataaaatcttacagaacacgttggacaattctgaagatgatactttacaga 706
            |||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 8161 cacaattagataaaatcttacagaacacgttggacaattctgaggaggatactttacaga 8220

                                                                        
Query: 707  taagctctactttcaactcatccgataacctaccatctagccctaagcaaaatttcngat 766
            |||||||||||||||||||||||||||||||||||||||| ||||||  ||| ||| |||
Sbjct: 8221 taagctctactttcaactcatccgataacctaccatctag-cctaaggcaaaattcggat 8279

                                                                        
Query: 767  ttcagtgttattgataaactcgggccgattttggagcaacaatttgaatgattggcccca 826
            | ||||| || |||| |||||||||||| ||||||||||||| |||||||||  | ||||
Sbjct: 8280 tccagtg-taatgat-aactcgggccga-tttggagcaacaa-ttgaatgat--ggccca 8333

                                                                        
Query: 827  gatagtttcaatcaataaaacaccttttgcatttcttcagtccaaatctccatcacatgg 886
            ||||| |||||||||||||||||| |||||| ||||||||| ||||||||||||||||||
Sbjct: 8334 gatag-ttcaatcaataaaacacc-tttgca-ttcttcagt-caaatctccatcacatgg 8389

               
Query: 887  ctt 889
            |||
Sbjct: 8390 ctt 8392


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6619
Number of Sequences: 1807
Number of extensions: 6619
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 932
length of database: 10,358,551
effective HSP length: 16
effective length of query: 916
effective length of database: 10,329,639
effective search space: 9461949324
effective search space used: 9461949324
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)