BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZE04FM1.SCF screened BAC_end
         (921 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1736                                                        1481   0.0  

>3x_Contig1736 
          Length = 21222

 Score = 1481 bits (747), Expect = 0.0
 Identities = 809/823 (98%), Gaps = 5/823 (0%)
 Strand = Plus / Plus

                                                                         
Query: 87    tttgtcgatttaattcctggttttaaatattcatgttagtaacttcaagttccacatacc 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9247  tttgtcgatttaattcctggttttaaatattcatgttagtaacttcaagttccacatacc 9306

                                                                         
Query: 147   agttttgtcatattaatccaataacatacgatctgttgcttttgttgctcagacaaattc 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9307  agttttgtcatattaatccaataacatacgatctgttgcttttgttgctcagacaaattc 9366

                                                                         
Query: 207   atcatatatttatttcagatatgaacaatcttcaacgcaccagacacggcagtattccga 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9367  atcatatatttatttcagatatgaacaatcttcaacgcaccagacacggcagtattccga 9426

                                                                         
Query: 267   gccatgtcttctaacctcatcccacctcatctcatctcatctcatctcatctcatcttcc 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9427  gccatgtcttctaacctcatcccacctcatctcatctcatctcatctcatctcatcttcc 9486

                                                                         
Query: 327   tatatttgctttcaaacgttaaagtggtattgattgataatgacaaaaaataagttgatc 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9487  tatatttgctttcaaacgttaaagtggtattgattgataatgacaaaaaataagttgatc 9546

                                                                         
Query: 387   acatgatcacaaaactacaatcagtattacgaattataaattaatttggtatttaaaaca 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9547  acatgatcacaaaactacaatcagtattacgaattataaattaatttggtatttaaaaca 9606

                                                                         
Query: 447   gttttgcaaacgatactgatgcattctaccagccttccatggtgtagtcatgttctatgc 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9607  gttttgcaaacgatactgatgcattctaccagccttccatggtgtagtcatgttctatgc 9666

                                                                         
Query: 507   ctggtgttacactggttatgaactttaggaatacgactaggtattgatcgacccgcaagc 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9667  ctggtgttacactggttatgaactttaggaatacgactaggtattgatcgacccgcaagc 9726

                                                                         
Query: 567   catcatcaacatcggattgtaaatcttcccagtcctcatcggttgtctggggatcgactt 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9727  catcatcaacatcggattgtaaatcttcccagtcctcatcggttgtctggggatcgactt 9786

                                                                         
Query: 627   tcctcgcacggcttcttgaactccgtactttctccataagtaccttcatgacgtttgcgt 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9787  tcctcgcacggcttcttgaactccgtactttctccataagtaccttcatgacgtttgcgt 9846

                                                                         
Query: 687   gcttacatggatgtattgatacggaaatattattccccttcaaaaaggggagtggctcga 746
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9847  gcttacatggatgtattgatacggaaatattattccccttcaaaaaggggagtggctcga 9906

                                                                         
Query: 747   tagttgctgtcttggatcgatattctgctgctatatcttcaaacatctgatccgggggat 806
             |||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 9907  tagttgctgtcttggatcgataatctgctgctatatcttcaaacatctgatcc-ggggat 9965

                                                                         
Query: 807   agcggcgtttccatcattatcatacccacataagttccatctttggtacacgattcgaag 866
             ||||||| |||||||||||||||||||||||||| | ||||||||||||||||| || ||
Sbjct: 9966  agcggcg-ttccatcattatcatacccacataag-tacatctttggtacacgatacg-ag 10022

                                                        
Query: 867   gtccgattccttattatataagtcgtagaattttaaggtggaa 909
             || ||| | | |  ||||||||||||||||| |||||||||||
Sbjct: 10023 gt-cgagtacgttatatataagtcgtagaatcttaaggtggaa 10064


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7551
Number of Sequences: 1807
Number of extensions: 7551
Number of successful extensions: 833
Number of sequences better than 1.0e-20: 1
length of query: 921
length of database: 10,358,551
effective HSP length: 16
effective length of query: 905
effective length of database: 10,329,639
effective search space: 9348323295
effective search space used: 9348323295
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)