BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZE07FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig146 1302 0.0 >3x_Contig146 Length = 1181 Score = 1302 bits (657), Expect = 0.0 Identities = 710/721 (98%), Gaps = 5/721 (0%) Strand = Plus / Minus Query: 87 ttgaatgaattgagatggaaaaactacgaagaatctggatccatcagcagtgaaggttcc 146 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct: 1025 ttgaatgaattgagatggaaaaattacgaagaatctggatccatcagcagtgaaggtccc 966 Query: 147 atattagaacccatcttctacaaatacctactaagcttttgtgagaatacgggtgatgta 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 965 atattagaacccatcttctacaaatacctactaagcttttgtgagaatacgggtgatgta 906 Query: 207 gtaaaacaaggttgcgaaaggatcatcatccatgaaacttgggaacccatggacaaagaa 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 905 gtaaaacaaggttgcgaaaggatcatcatccatgaaacttgggaacccatggacaaagaa 846 Query: 267 gctgatcaatggtatagtaggtc-tgcatatgatatttctcgactcatctcagatacgtt 325 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 845 gctgatcaatggtatagtaggtcctgcatatgatatttctcgactcatctcagatacgtt 786 Query: 326 aagactagtggaacaacttcaatggaatgatctggcccagttgggtactgcctactctgt 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 785 aagactagtggaacaacttcaatggaatgatctggcccagttgggtactgcctactctgt 726 Query: 386 agttttgggaaagatcagtgaatgtgttctccattacgcaagatgtatggaagatatagt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 agttttgggaaagatcagtgaatgtgttctccattacgcaagatgtatggaagatatagt 666 Query: 446 gagagaagatctatgcataagcgaaaatgatgaacaaaatggtcaaggccaaggcatggg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 gagagaagatctatgcataagcgaaaatgatgaacaaaatggtcaaggccaaggcatggg 606 Query: 506 acacagactgggcaacgatgtatctatcttcaaggacatgaaatcagcgatccaatcttc 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 acacagactgggcaacgatgtatctatcttcaaggacatgaaatcagcgatccaatcttc 546 Query: 566 caagttgtggaacaaccaatggaaacaacaattgcaaggcaagagaagacgttcaaatgt 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 caagttgtggaacaaccaatggaaacaacaattgcaaggcaagagaagacgttcaaatgt 486 Query: 626 tgatgctgttgatgctgcctcagctgcctcagcttcagataccgaatctgcaacaacaac 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 tgatgctgttgatgctgcctcagctgcctcagcttcagataccgaatctgcaacaacaac 426 Query: 686 gactatcagc-actgctgctactggatatgtgatctcgatgagaagctgtgtttgtttaa 744 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 425 gacta-cagcaactgctgctactggatatgtgatctcgatgagaagctgtgtttgtttaa 367 Query: 745 ac-acatggcattgattttg-acatgattgatgaaatagagaaaagtttccatttaaacc 802 || ||||||||| ||| ||| |||||||||||||| |||||||||||||||| ||||||| Sbjct: 366 acaacatggcatcgatattgaacatgattgatgaagtagagaaaagtttccaattaaacc 307 Query: 803 a 803 | Sbjct: 306 a 306 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6454 Number of Sequences: 1807 Number of extensions: 6454 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)