BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZE12FM1.SCF screened BAC_end (935 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1216 1191 0.0 >3x_Contig1216 Length = 5132 Score = 1191 bits (601), Expect = 0.0 Identities = 629/636 (98%), Gaps = 2/636 (0%) Strand = Plus / Minus Query: 85 tcaaagcattcgacgttataattactggtgacgatcccagaattccaaaaggcagaggta 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1415 tcaaagcattcgacgttataattactggtgacgatcccagaattccaaaaggcagaggta 1356 Query: 145 aaccttttccagatatctggcaactggggttgaaggaattaaatgctaaattcaacacag 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1355 aaccttttccagatatctggcaactggggttgaaggaattaaatgctaaattcaacacag 1296 Query: 205 atattgagagtaacgaatgtctagtctttgaagatggtattcctggggtcaatgctggaa 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1295 atattgagagtaacgaatgtctagtctttgaagatggtattcctggggtcaatgctggaa 1236 Query: 265 agagttttggcgcatacgtcatctgggtccctcataaagatgcgattgcgctagtcaaag 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1235 agagttttggcgcatacgtcatctgggtccctcataaagatgcgattgcgctagtcaaag 1176 Query: 325 accacaaaatattaggcgatagaggtgaaatgctagaatctttagaacactttgaccgtt 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1175 accacaaaatattaggcgatagaggtgaaatgctagaatctttagaacactttgaccgtt 1116 Query: 385 ccaagtttggattatagttaagtaaaagagagtacatatgtcttaactggatttcagaca 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1115 ccaagtttggattatagttaagtaaaagagagtacatatgtcttaactggatttcagaca 1056 Query: 445 aaggcatagttaatactcgaagtacttttttgaatagagagattaaataatgtcttctta 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1055 aaggcatagttaatactcgaagtacttttttgaatagagagattaaataatgtcttctta 996 Query: 505 taagttactacgaacttagttgacttaccgtcatgggatatatgttacatcgacgccttg 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 995 taagttactacgaacttagttgacttaccgtcatgggatatatgttacatcgacgccttg 936 Query: 565 ttattgcttatagtggnagaatgaaaagagttaacgttcagtgaacgtgagtcaatcggc 624 |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 935 ttattgcttatagtggaggaatgaaaagagtaaacgttcagtgaacgtgagtcaatcggc 876 Query: 625 aaacaggacagccagttggatgagttaatttaacagtgaatcatcagagagggtagtttc 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 875 aaacaggacagccagttggatgagttaatttaacagtgaatcatcagagagggtag-ttc 817 Query: 685 ttgaacaaatttgaaatacttttaccgcttgtgcaa 720 |||||||||| ||||||||||| |||| |||||||| Sbjct: 816 ttgaacaaatatgaaatactttcaccg-ttgtgcaa 782 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8036 Number of Sequences: 1807 Number of extensions: 8036 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 935 length of database: 10,358,551 effective HSP length: 16 effective length of query: 919 effective length of database: 10,329,639 effective search space: 9492938241 effective search space used: 9492938241 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)