BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZF04FM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1800 1281 0.0 >3x_Contig1800 Length = 38778 Score = 1281 bits (646), Expect = 0.0 Identities = 726/746 (97%), Gaps = 5/746 (0%) Strand = Plus / Plus Query: 86 catagaagtgttcaagtttattttgttagcaaagatcgtgtacttctgaacagtctcaaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5814 catagaagtgttcaagtttattttgttagcaaagatcgtgtacttctgaacagtctcaaa 5873 Query: 146 cccatagtaaaatacaactggggatatacgagagttaaccgtgactacagctagagaacc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5874 cccatagtaaaatacaactggggatatacgagagttaaccgtgactacagctagagaacc 5933 Query: 206 attagaacctttttcgacactcactccatggatgttttgcttcattaaatcaatattgta 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5934 attagaacctttttcgacactcactccatggatgttttgcttcattaaatcaatattgta 5993 Query: 266 cttcttccagttcttaaagtccctaggttcatcattattcgttggaggtctccagaaagt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5994 cttcttccagttcttaaagtccctaggttcatcattattcgttggaggtctccagaaagt 6053 Query: 326 gattgaagaaccctcaaacttgctggaaatttccttacccttgacctttaggctttcaat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6054 gattgaagaaccctcaaacttgctggaaatttccttacccttgacctttaggctttcaat 6113 Query: 386 ttta-cccaacaatttgtccaagataaaatgcaatccactggattcaactgagacataac 444 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6114 tttaccccaacaatttgtccaagataaaatgcaatccactggattcaactgagacataac 6173 Query: 445 gtttaccgtcgttgatcttcgcagctttttctgctgtctctgtaacaaaatcgggtacct 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6174 gtttaccgtcgttgatcttcgcagctttttctgctgtctctgtaacaaaatcgggtacct 6233 Query: 505 tcaatggaagttcagcttggccccaggcaatttcatgacctgcctttagaacaccagcat 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6234 tcaatggaagttcagcttggccccaggcaatttcatgacctgcctttagaacaccagcat 6293 Query: 565 catcttttcacacggcaacaacataagttgtatcagaaggaatagtaacagattcttctg 624 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6294 catctttcaacacggcaacaacataagttgtatcagaaggaatagtaacagattcttctg 6353 Query: 625 gcttt-aagatggaacgtcgattgtcttttccgtgtccttgtcgat-aacaataagtggt 682 ||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||| Sbjct: 6354 gctttaaagatggaacgtcgattgtctttcccgtgtccttgtcgataaacaataagtggt 6413 Query: 683 ctggcgtaatgaaatcgtgcttattt-tgattggtacagatccgtgcgcattttttatat 741 ||| ||||||||| |||||||||||| |||||| |||||||||||||||| |||| |||| Sbjct: 6414 ctgtcgtaatgaagtcgtgcttatttgtgattgttacagatccgtgcgcaattttaatat 6473 Query: 742 gaacgggttcaataaccctcttatactttacaaggcccggagtaggaatatgcttccctg 801 ||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| || ||| Sbjct: 6474 gaacgggttcaataaccttcttatactctacaaggcccggagtaggattatgc-tcactg 6532 Query: 802 gtacccaaaccttccatgatgaacac 827 ||| |||||| |||||||||||||| Sbjct: 6533 ttacacaaaccatccatgatgaacac 6558 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6092 Number of Sequences: 1807 Number of extensions: 6092 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)