BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZG01FM1.SCF screened BAC_end
         (926 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1498                                                        1503   0.0  

>3x_Contig1498 
          Length = 12634

 Score = 1503 bits (758), Expect = 0.0
 Identities = 827/842 (98%), Gaps = 6/842 (0%)
 Strand = Plus / Plus

                                                                        
Query: 87   gtaaaggcatatctttttcgtagtttctcatactccactatcattgcgttggtatcctca 146
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8253 gtaaaggcatatctttttcgtagtttctcatactccactatcattgcgttggtatcctca 8312

                                                                        
Query: 147  caattaaatttatcaaagtaagcgatgttgtatttcacagtactcaacaaatatttagtg 206
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8313 caattaaatttatcaaagtaagcgatgttgtatttcacagtactcaacaaatatttagtg 8372

                                                                        
Query: 207  acgataacatgggattcgttattcaacttctttaaagttgataaaaatttctttggctcc 266
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8373 acgataacatgggattcgttattcaacttctttaaagttgataaaaatttctttggctcc 8432

                                                                        
Query: 267  tttaacctcacgaaaaatgcaagcaatgacctgtatatgatataagtagccctactgtcc 326
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8433 tttaacctcacgaaaaatgcaagcaatgacctgtatatgatataagtagccctactgtcc 8492

                                                                        
Query: 327  gttgggtccctggtcacaatgctctttgcaaataatttgtcacataggtatctgcctttg 386
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8493 gttgggtccctggtcacaatgctctttgcaaataatttgtcacataggtatctgcctttg 8552

                                                                        
Query: 387  tatcgagacgctaacatggccaattggatatagttctggaaattcaattcgcgttgatgc 446
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8553 tatcgagacgctaacatggccaattggatatagttctggaaattcaattcgcgttgatgc 8612

                                                                        
Query: 447  tccttcacaaatcgttcgatcatttttaaactctgagatctcatgatttcattaggttgt 506
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8613 tccttcacaaatcgttcgatcatttttaaactctgagatctcatgatttcattaggttgt 8672

                                                                        
Query: 507  tgtgctttccgtagttgatatgctaatttgtacaagtttgcacgtaagtttagaattttg 566
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8673 tgtgctttccgtagttgatatgctaatttgtacaagtttgcacgtaagtttagaattttg 8732

                                                                        
Query: 567  accttcaaagg-atggtcctatacgagctcttgagcgtcgtatccaaaatgttacacatc 625
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8733 accttcaaaggaatggtcctatacgagctcttgagcgtcgtatccaaaatgttacacatc 8792

                                                                        
Query: 626  ggtaagtggcctttgttcacacagaactttttcaaggtgtagaagaactgaaaattaggc 685
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8793 ggtaagtggcctttgttcacacagaactttttcaaggtgtagaagaactgaaaattaggc 8852

                                                                        
Query: 686  cttatccctaacctggcttgatccattattatcgttctcgcacggcggtaacgaccgttt 745
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8853 cttatccctaacctggcttgatccattattatcgttctcgcacggcggtaacgaccgttt 8912

                                                                        
Query: 746  tctaagatcttctctaccctttt-aaaagtttattgtcgacccgttgttcatttcttctg 804
            ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 8913 tctaagatcttctctacccttttcaaaagtttagtgtcgacccgttgttcatttcttctg 8972

                                                                        
Query: 805  gaaaaagtgtcatctcctgtgaacgtccgaagttttctcatatgattgcaggctcatggg 864
            ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||   ||
Sbjct: 8973 gaaaaagtgtcatctcctgtg-acgtccgaagttttctcatatgattgca-gctccatgg 9030

                                                                        
Query: 865  aaccagattaccatgggtaccttccttttataccaccctggtatcaaataaggatttcat 924
            ||| |||| |||||||||| | ||||||||||||| |||| |||||||||| ||||||||
Sbjct: 9031 aacgagataaccatgggta-cgtccttttatacca-cctgttatcaaataatgatttcat 9088

              
Query: 925  tt 926
            ||
Sbjct: 9089 tt 9090


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6071
Number of Sequences: 1807
Number of extensions: 6071
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)