BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZG02FM1.SCF screened BAC_end (915 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1452 1467 0.0 >3x_Contig1452 Length = 10057 Score = 1467 bits (740), Expect = 0.0 Identities = 806/820 (98%), Gaps = 8/820 (0%) Strand = Plus / Minus Query: 86 taaggttgaattccagagttgtcttgtgcatttttaaattttcaagtgcaattcgataag 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1669 taaggttgaattccagagttgtcttgtgcatttttaaattttcaagtgcaattcgataag 1610 Query: 146 actcttcagagtcacgtaactcctcgtcgtatgtgtcaatttcaacttcatctggtaaag 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1609 actcttcagagtcacgtaactcctcgtcgtatgtgtcaatttcaacttcatctggtaaag 1550 Query: 206 actccttgagtctagattcaattgaagtgatattggactctatttcatagatttgctcct 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1549 actccttgagtctagattcaattgaagtgatattggactctatttcatagatttgctcct 1490 Query: 266 ctataccttggagttgattctcgtattgtatgaactcctttgtggctatgtcactatcgt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1489 ctataccttggagttgattctcgtattgtatgaactcctttgtggctatgtcactatcgt 1430 Query: 326 tttttatcttttttaggtccactctttttttgtctaaaatagaattgaattgagagagca 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1429 tttttatcttttttaggtccactctttttttgtctaaaatagaattgaattgagagagca 1370 Query: 386 aatcgccttccaaattaaaagatacgctaactaaattggctccctcttcaagctgcttct 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1369 aatcgccttccaaattaaaagatacgctaactaaattggctccctcttcaagctgcttct 1310 Query: 446 tgatggtttcaacatctttttttttcgtactttctgaagctttcaaaagggacaatttgg 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1309 tgatggtttcaacatctttttttttcgtactttctgaagctttcaaaagggacaatttgg 1250 Query: 506 catataagtcggagtgctgatttgctttggttatttgttgttggataacttctagttcat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1249 catataagtcggagtgctgatttgctttggttatttgttgttggataacttctagttcat 1190 Query: 566 cttctaacgaaagaatatcttgattcttcgtttttatagaggtagaaatcgcatcaacaa 625 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1189 cttctaacgaaagaatatcttgattcttcgtttttatagaggtagaaatcgcatcaacaa 1130 Query: 626 ttctctcagtattccactgcttcaatttagactcgtaattgttcagagcttctttttcga 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1129 ttctctcagtattccactgcttcaatttagactcgtaattgttcagagcttctttttcga 1070 Query: 686 cttttaaatctttttcactaaccctcttatcatttaatcgattcctttagc-ttttggtc 744 ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 1069 cttttaaatctttttcactaaccctcttatcatttaatcgattcc-ttagctttttggtc 1011 Query: 745 tggtccgccagcttattcaaatcgcttgaaatatatgacaattgctgttccttttttcgc 804 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 1010 tggtccgccagcttattcaaatcgcttgaaatatatgacaattgctgttcc-tttttcgc 952 Query: 805 aaacgaattncgtaaaactgataatttctcctcccaatgtagttncttccgaaatgttgt 864 ||||||||| |||||||||||||||||||||| ||||||||||| ||| ||||||| ||| Sbjct: 951 aaacgaatttcgtaaaactgataatttctcct-ccaatgtagtttctt-cgaaatggtgt 894 Query: 865 ttggnncaagcagctttncaaggttctttattggctgtat 904 |||| ||||||| || |||||||| ||||||||||||| Sbjct: 893 ttgg--caagcaggctttcaaggttc-ttattggctgtat 857 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7788 Number of Sequences: 1807 Number of extensions: 7788 Number of successful extensions: 64 Number of sequences better than 1.0e-20: 1 length of query: 915 length of database: 10,358,551 effective HSP length: 16 effective length of query: 899 effective length of database: 10,329,639 effective search space: 9286345461 effective search space used: 9286345461 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)