BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZG05RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig429 787 0.0 >3x_Contig429 Length = 1524 Score = 787 bits (397), Expect = 0.0 Identities = 498/519 (95%), Gaps = 10/519 (1%) Strand = Plus / Minus Query: 341 cttgtgtcatgttctacctttgctgttttcgtatacacggaggaaagaccattatccact 400 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 1524 cttgtgtcatgttctacctntgctgttntcgtatacacggaggaaagaccattatccact 1465 Query: 401 gatctagtcttccctgcattaactcttttcaatttattgtcattccctcttgctgttgtt 460 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1464 gatctagtcttccctgcattaactcttttcaatttattgtcattccctcttgctgttgtt 1405 Query: 461 cctaatgcaatctcttcatttattgaagcatctgtgtccataaatagactctttgcattt 520 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1404 cctaatgcaatctcttcatttattgaagcatctgtgtccataaatagactctttgcattt 1345 Query: 521 ttgactaacgaagagttgcaaaatgatgccgttttacgtgaacc-aaagtaaagaatatt 579 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1344 ttgactaacgaagagttgcaaaatgatgccgttttacgtgaaccaaaagtaaagaatatt 1285 Query: 580 ggtgacgaaggtgttaaagtcaacgatgcatctttcttatggcaacgcaaacctgaatat 639 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 1284 ggtgacgaaggtgttaaagtcaacgatgcaactttcttatggcaacgcaaacctgaatat 1225 Query: 640 -aagttgccttg-aaaacataaa-tttgttgccaag-aaggtgaactaacatgtatcgtg 695 ||||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| Sbjct: 1224 aaagttgccttgaaaaacataaattttgttgccaagaaaggtgaactaacatgtatcgtg 1165 Query: 696 gggaaagtgggtagtggttagagtgcacttattc-aagtctactaggagatttgattaga 754 |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| Sbjct: 1164 gggaaagtgggtagtggtaagagtgcacttattcaaagtctactaggagatttgattaga 1105 Query: 755 gtggaaggtttcgccactgttcacggttgacgtcgccaacgttttacaggttcccatgga 814 ||| | |||||||| ||||||||||| ||||||||||||||||| ||||||| ||||||| Sbjct: 1104 gtgaagggtttcgcaactgttcacgg-tgacgtcgccaacgtttcacaggtt-ccatgga 1047 Query: 815 ttatgaaagggtactgttaaaaaataatatcttggttgg 853 ||||| || ||||||||| ||| ||||||||||| |||| Sbjct: 1046 ttatg-aatggtactgtt-aaagataatatcttgtttgg 1010 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7900 Number of Sequences: 1807 Number of extensions: 7900 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)