BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZG08RM1.SCF screened BAC_end (916 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1725 1447 0.0 >3x_Contig1725 Length = 17473 Score = 1447 bits (730), Expect = 0.0 Identities = 840/869 (96%), Gaps = 6/869 (0%) Strand = Plus / Plus Query: 46 cttcgtagtaggtacaaatcattgaaaaatgaagaaacagaggtcaagctatctattagc 105 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 12313 cttcgtagtaggtacaaatcatcgaaaaatgaagaaacagaggtcaagctatctattagc 12372 Query: 106 aaatcttcaagtgaatttgaaggggcatcttcgttggcaattaatgattttatagtctta 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12373 aaatcttcaagtgaatttgaaggggcatcttcgttggcaattaatgattttatagtctta 12432 Query: 166 gttgcatcaagcaacttttctgtgtcgtcctccttatccccacacattttttgattatac 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12433 gttgcatcaagcaacttttctgtgtcgtcctccttatccccacacattttttgattatac 12492 Query: 226 ctcacaatggaccttccgattcaatgttattgagctgaattggtctaacgtttagatcag 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12493 ctcacaatggaccttccgattcaatgttattgagctgaattggtctaacgtttagatcag 12552 Query: 286 ttgatagaggtgtgactgcattgttatcgtctccttcattttttttttttagatgttctt 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12553 ttgatagaggtgtgactgcattgttatcgtctccttcattttttttttttagatgttctt 12612 Query: 346 tttgagctctattatgacattgaatcatcaattaacaattcaataggaattttttctaat 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12613 tttgagctctattatgacattgaatcatcaattaacaattcaataggaattttttctaat 12672 Query: 406 gttcacgtgaaagaaaaaataataacattgcagccatctggtggactgtccgaacgataa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12673 gttcacgtgaaagaaaaaataataacattgcagccatctggtggactgtccgaacgataa 12732 Query: 466 tatttttagatcacgaaagttataaccagagtaatagtgtggagtactatcaagaagttc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12733 tatttttagatcacgaaagttataaccagagtaatagtgtggagtactatcaagaagttc 12792 Query: 526 ccaatcaatacactaactcttataaaataaaattatcaggtgttaccgaactaaacacat 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 12793 ccaatcaatacactaactcttataaaataaaattatcaggtgttaccgaactaaacacat 12852 Query: 586 gtacataacgatacctatgcagaacagccatctcttaacacgtttcggctattaaat-ac 644 ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| || Sbjct: 12853 gtacataacgatacctaggcagaacagccatctcttaacacgtttcggctataaaataac 12912 Query: 645 agataagtgaaacaactgtcaccagaataatcacgtgacatccatcatggcagaaaaaac 704 ||||||||||||||||||||||||| | |||||||||||| ||||||||||||||||||| Sbjct: 12913 agataagtgaaacaactgtcaccaggaaaatcacgtgacaaccatcatggcagaaaaaac 12972 Query: 705 tacctcaactgatatctcgtactcattggagaccccgtcc-atcatttacatatcttcag 763 |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| ||| Sbjct: 12973 tacctcaactgatatctcgtactcattggaga-cccgtccaatcattcacatatctccag 13031 Query: 764 atagcaaactttttggaaatttttgctcttccatttttctacttatcttctagtcatgtc 823 | ||| ||||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 13032 aaagc-aactttttggaaagttttgctcttcca-ttttctacttatcttctagtcatgtc 13089 Query: 824 acccacacaacgnatttccggagaatcaagcaccttttattacccggtctgttcggac-a 882 ||| ||||||| | | | | ||||||||||| || | |||||||||||||| ||||| | Sbjct: 13090 accaacacaacagagtacagaagaatcaagcaactataattacccggtctgtccggacaa 13149 Query: 883 agttgctgtgttacttccctgtgtttttt 911 ||||||||||||||| || |||||||||| Sbjct: 13150 agttgctgtgttactcccatgtgtttttt 13178 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,057 Number of Sequences: 1807 Number of extensions: 14057 Number of successful extensions: 85 Number of sequences better than 1.0e-20: 1 length of query: 916 length of database: 10,358,551 effective HSP length: 16 effective length of query: 900 effective length of database: 10,329,639 effective search space: 9296675100 effective search space used: 9296675100 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)