BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC32ZG08RM1.SCF screened BAC_end
         (916 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1725                                                        1447   0.0  

>3x_Contig1725 
          Length = 17473

 Score = 1447 bits (730), Expect = 0.0
 Identities = 840/869 (96%), Gaps = 6/869 (0%)
 Strand = Plus / Plus

                                                                         
Query: 46    cttcgtagtaggtacaaatcattgaaaaatgaagaaacagaggtcaagctatctattagc 105
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 12313 cttcgtagtaggtacaaatcatcgaaaaatgaagaaacagaggtcaagctatctattagc 12372

                                                                         
Query: 106   aaatcttcaagtgaatttgaaggggcatcttcgttggcaattaatgattttatagtctta 165
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12373 aaatcttcaagtgaatttgaaggggcatcttcgttggcaattaatgattttatagtctta 12432

                                                                         
Query: 166   gttgcatcaagcaacttttctgtgtcgtcctccttatccccacacattttttgattatac 225
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12433 gttgcatcaagcaacttttctgtgtcgtcctccttatccccacacattttttgattatac 12492

                                                                         
Query: 226   ctcacaatggaccttccgattcaatgttattgagctgaattggtctaacgtttagatcag 285
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12493 ctcacaatggaccttccgattcaatgttattgagctgaattggtctaacgtttagatcag 12552

                                                                         
Query: 286   ttgatagaggtgtgactgcattgttatcgtctccttcattttttttttttagatgttctt 345
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12553 ttgatagaggtgtgactgcattgttatcgtctccttcattttttttttttagatgttctt 12612

                                                                         
Query: 346   tttgagctctattatgacattgaatcatcaattaacaattcaataggaattttttctaat 405
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12613 tttgagctctattatgacattgaatcatcaattaacaattcaataggaattttttctaat 12672

                                                                         
Query: 406   gttcacgtgaaagaaaaaataataacattgcagccatctggtggactgtccgaacgataa 465
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12673 gttcacgtgaaagaaaaaataataacattgcagccatctggtggactgtccgaacgataa 12732

                                                                         
Query: 466   tatttttagatcacgaaagttataaccagagtaatagtgtggagtactatcaagaagttc 525
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12733 tatttttagatcacgaaagttataaccagagtaatagtgtggagtactatcaagaagttc 12792

                                                                         
Query: 526   ccaatcaatacactaactcttataaaataaaattatcaggtgttaccgaactaaacacat 585
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12793 ccaatcaatacactaactcttataaaataaaattatcaggtgttaccgaactaaacacat 12852

                                                                         
Query: 586   gtacataacgatacctatgcagaacagccatctcttaacacgtttcggctattaaat-ac 644
             ||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 12853 gtacataacgatacctaggcagaacagccatctcttaacacgtttcggctataaaataac 12912

                                                                         
Query: 645   agataagtgaaacaactgtcaccagaataatcacgtgacatccatcatggcagaaaaaac 704
             ||||||||||||||||||||||||| | |||||||||||| |||||||||||||||||||
Sbjct: 12913 agataagtgaaacaactgtcaccaggaaaatcacgtgacaaccatcatggcagaaaaaac 12972

                                                                         
Query: 705   tacctcaactgatatctcgtactcattggagaccccgtcc-atcatttacatatcttcag 763
             |||||||||||||||||||||||||||||||| ||||||| |||||| |||||||| |||
Sbjct: 12973 tacctcaactgatatctcgtactcattggaga-cccgtccaatcattcacatatctccag 13031

                                                                         
Query: 764   atagcaaactttttggaaatttttgctcttccatttttctacttatcttctagtcatgtc 823
             | ||| ||||||||||||| ||||||||||||| ||||||||||||||||||||||||||
Sbjct: 13032 aaagc-aactttttggaaagttttgctcttcca-ttttctacttatcttctagtcatgtc 13089

                                                                         
Query: 824   acccacacaacgnatttccggagaatcaagcaccttttattacccggtctgttcggac-a 882
             ||| |||||||  | | | | ||||||||||| || | |||||||||||||| ||||| |
Sbjct: 13090 accaacacaacagagtacagaagaatcaagcaactataattacccggtctgtccggacaa 13149

                                          
Query: 883   agttgctgtgttacttccctgtgtttttt 911
             ||||||||||||||| || ||||||||||
Sbjct: 13150 agttgctgtgttactcccatgtgtttttt 13178


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,057
Number of Sequences: 1807
Number of extensions: 14057
Number of successful extensions: 85
Number of sequences better than 1.0e-20: 1
length of query: 916
length of database: 10,358,551
effective HSP length: 16
effective length of query: 900
effective length of database: 10,329,639
effective search space: 9296675100
effective search space used: 9296675100
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)