BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZH10FM1.SCF screened BAC_end (950 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1296 1215 0.0 >3x_Contig1296 Length = 7334 Score = 1215 bits (613), Expect = 0.0 Identities = 654/665 (98%), Gaps = 2/665 (0%) Strand = Plus / Minus Query: 86 atcactgatcttggaggtccaagcgttgacacatcaaactctgtacgtaagaaccaagaa 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2362 atcactgatcttggaggtccaagcgttgacacatcaaactctgtacgtaagaaccaagaa 2303 Query: 146 aagaccagcatccccttatattttgggtaggcatagttaacaatttgttacactcatagc 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2302 aagaccagcatccccttatattttgggtaggcatagttaacaatttgttacactcatagc 2243 Query: 206 acatacgtttcaatcacagaaaacctagtttaatctccacacaaaaatacctagcaaaca 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2242 acatacgtttcaatcacagaaaacctagtttaatctccacacaaaaatacctagcaaaca 2183 Query: 266 ttcacagagacatgaatggttttaattgtaccacaactcggaagtgtactggcaacacaa 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2182 ttcacagagacatgaatggttttaattgtaccacaactcggaagtgtactggcaacacaa 2123 Query: 326 atatataactcagacgtacgttctttcaaatttaaatatttatcctgtcttattctttag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2122 atatataactcagacgtacgttctttcaaatttaaatatttatcctgtcttattctttag 2063 Query: 386 ttggacagaatgagaaataattgtggaacggggcagaagagtgtgtggtatgaatttgtt 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2062 ttggacagaatgagaaataattgtggaacggggcagaagagtgtgtggtatgaatttgtt 2003 Query: 446 tcaaaaaactcgataccatccgagaatattatttactattcggacctcaacagctcaggt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2002 tcaaaaaactcgataccatccgagaatattatttactattcggacctcaacagctcaggt 1943 Query: 506 tcggagttccggcgtccacctggtgcagtaactgtctgtgatactcaaaactgagaaaat 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1942 tcggagttccggcgtccacctggtgcagtaactgtctgtgatactcaaaactgagaaaat 1883 Query: 566 accgagaaacgaacatcgatgttcgtaggaaaagcatcgatcggcacatgaaaaacatgg 625 ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1882 accgagaaacgaacatcgaggttcgtaggaaaagcatcgatcggcacatgaaaaacatgc 1823 Query: 626 ctttgcgtattggaaatcggagcttgacattgtggaaacctagtatctttttcgg-agaa 684 ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| Sbjct: 1822 ttttgcgtattggaaatcggagcttgacattgtggaaacctagtatctatatcggaagaa 1763 Query: 685 aattcagtttttattttac-cctggtttgattacctttggttcactgtgattagactttt 743 ||| ||||||||||||||| |||||||||| |||||||| | |||||||||||||||||| Sbjct: 1762 aatccagtttttattttacacctggtttgaatacctttgttccactgtgattagactttt 1703 Query: 744 cacct 748 ||||| Sbjct: 1702 cacct 1698 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6508 Number of Sequences: 1807 Number of extensions: 6508 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 950 length of database: 10,358,551 effective HSP length: 16 effective length of query: 934 effective length of database: 10,329,639 effective search space: 9647882826 effective search space used: 9647882826 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)