BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZH10RM1.SCF screened BAC_end (949 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1587 1360 0.0 >3x_Contig1587 Length = 10277 Score = 1360 bits (686), Expect = 0.0 Identities = 774/793 (97%), Gaps = 8/793 (1%) Strand = Plus / Minus Query: 46 tcttgaattgaaatcgcatatgtttggaaacactacagcaagcatttcaagacagcaatc 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3153 tcttgaattgaaatcgcatatgtttggaaacactacagcaagcatttcaagacagcaatc 3094 Query: 106 tttctgtgggaaatcaggacagcctacattacaaaacaataactgtaatactactaatac 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3093 tttctgtgggaaatcaggacagcctacattacaaaacaataactgtaatactactaatac 3034 Query: 166 acttcttacagaacaaactttaacgaataacactaatgcaactagtgcagcaacaactac 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3033 acttcttacagaacaaactttaacgaataacactaatgcaactagtgcagcaacaactac 2974 Query: 226 tctgacttctcctgttggtcagaatagtaatgcaagcatttcacgcttacacaacttgtt 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2973 tctgacttctcctgttggtcagaatagtaatgcaagcatttcacgcttacacaacttgtt 2914 Query: 286 aagtacggagaataaggacgtgaatagttcttctgaacaattggcacactcattttcctc 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2913 aagtacggagaataaggacgtgaatagttcttctgaacaattggcacactcattttcctc 2854 Query: 346 gatggagattgtggacaacaaagtccctggcgatgaatccacgaaggaagctgcttttaa 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2853 gatggagattgtggacaacaaagtccctggcgatgaatccacgaaggaagctgcttttaa 2794 Query: 406 tacttcaattaacgagaatcggcctgatgtaatacaggtgaaaatagcagatttaggaaa 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2793 tacttcaattaacgagaatcggcctgatgtaatacaggtgaaaatagcagatttaggaaa 2734 Query: 466 tgcatgttggtacgacgaacattacaccaatgcaatccaaacaagagagtatcgttcacc 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2733 tgcatgttggtacgacgaacattacaccaatgcaatccaaacaagagagtatcgttcacc 2674 Query: 526 agaagtaattctagactgttcttggggtgccagtgcagatatatggtcttttgcctgctt 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2673 agaagtaattctagactgttcttggggtgccagtgcagatatatggtcttttgcctgctt 2614 Query: 586 aatatttgagcttctcacaggagatttcttgtttgaacncacatacggtcactcatatac 645 |||||||||||||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 2613 aatatttgagcttctcacaggagatttcttgtttgaaccacaaaacggtcactcatatac 2554 Query: 646 aaaggacgatgaccatattgcgcatatcataggattactgggcaatatttcagagagtct 705 |||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||| Sbjct: 2553 aaaggacgatgaccatattgcgcaaatcatagaattactgggcaatattccagagagtct 2494 Query: 706 aatgacgaccggcagacccgttagaaacttttttcacgtccaggggaggagttgagaaat 765 |||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 2493 aatgacgaccggcagagccgttag-aacttttttcacgtccagggga-gagttgagaaat 2436 Query: 766 attttcaagaattaaagtactggccatttgaagaagtggttttaattgaaaaagtacaac 825 | ||||||| |||||||||||||||| |||||| ||| |||||||||| ||||||||||| Sbjct: 2435 a-tttcaag-attaaagtactggcca-ttgaag-agt-gttttaattg-aaaagtacaac 2382 Query: 826 atggggcccaagg 838 |||| ||| |||| Sbjct: 2381 atggcgccaaagg 2369 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7052 Number of Sequences: 1807 Number of extensions: 7052 Number of successful extensions: 49 Number of sequences better than 1.0e-20: 1 length of query: 949 length of database: 10,358,551 effective HSP length: 16 effective length of query: 933 effective length of database: 10,329,639 effective search space: 9637553187 effective search space used: 9637553187 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)