BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZH11RM1.SCF screened BAC_end (928 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1519 763 0.0 >3x_Contig1519 Length = 9351 Score = 763 bits (385), Expect = 0.0 Identities = 408/413 (98%), Gaps = 2/413 (0%) Strand = Plus / Minus Query: 60 atattgggcttttttacttgcgtcattttcagtcttcattagatttttcacttctctacg 119 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2815 atattgggcttttttacttgcgtcattttcagtcttcattagatttttcacttctctacg 2756 Query: 120 tctttggaccaggttggccaataatcttggcagtacacctcgtgatttttctcttgaagg 179 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2755 tctttggaccaggttggccaataatcttggcagtacacctcgtgatttttctcttgaagg 2696 Query: 180 cacatctggaagttcttcattatcctgtggattcctgtcaacagtagtgaagcaaatatt 239 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2695 cacatctggaagttcttcattatcctgtggattcctgtcaacagtagtgaagcaaatatt 2636 Query: 240 aaactcttgaatgatagatgggtacaacgaattgaaatccatgaccaagatatagttttt 299 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2635 aaactcttgaatgatagatgggtacaacgaattgaaatccatgaccaagatatagttttt 2576 Query: 300 atgcaaacctttttctggttcaaagaccaacccaccctgatattttgattttttactgga 359 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2575 atgcaaacctttttctggttcaaagaccaacccaccctgatattttgattttttactgga 2516 Query: 360 cacttgtggctccataggatcttcattcttttgttgtctgtcttgcttcatttgccttgt 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2515 cacttgtggctccataggatcttcattcttttgttgtctgtcttgcttcatttgccttgt 2456 Query: 420 ttctttatcaagaacaaggtaatcattttcggttaaattcatggaagcaaaat 472 |||||||||| |||||| ||||||| |||| ||||||||||| |||||||||| Sbjct: 2455 ttctttatcaggaacaatgtaatca-tttctgttaaattcat-gaagcaaaat 2405 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 16,407 Number of Sequences: 1807 Number of extensions: 16407 Number of successful extensions: 153 Number of sequences better than 1.0e-20: 1 length of query: 928 length of database: 10,358,551 effective HSP length: 16 effective length of query: 912 effective length of database: 10,329,639 effective search space: 9420630768 effective search space used: 9420630768 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)