BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC32ZH12RM1.SCF screened BAC_end (946 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1320 1382 0.0 >3x_Contig1320 Length = 7350 Score = 1382 bits (697), Expect = 0.0 Identities = 804/829 (96%), Gaps = 9/829 (1%) Strand = Plus / Minus Query: 46 acattacctcatctctctattttttgagcccatgctttgggtacttgaccggtaaattcc 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1629 acattacctcatctctctattttttgagcccatgctttgggtacttgaccggtaaattcc 1570 Query: 106 ttacttttacaatacgaaaataattcataggtacgtaaatacaaatgtgaatcggttaat 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1569 ttacttttacaatacgaaaataattcataggtacgtaaatacaaatgtgaatcggttaat 1510 Query: 166 acaacaagatatattgtcgacattaggaaagtcacagaaaaatcttcaaggatagcgtac 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1509 acaacaagatatattgtcgacattaggaaagtcacagaaaaatcttcaaggatagcgtac 1450 Query: 226 actttcgaatacttacaatgcagaatgacaataaagaagaagtgccggctctggctgttt 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1449 actttcgaatacttacaatgcagaatgacaataaagaagaagtgccggctctggctgttt 1390 Query: 286 tactaggctcaaacgttaaaaattggccatattctgaggatacattggttcatgccctac 345 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1389 tactaggctcaaacgttaaaaattggccatattctgaggatacattggttcatgccctac 1330 Query: 346 aattaaagtctcaacaagaacaaacaaaaagacaatattataaactagagaatgtcaaca 405 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1329 aattaaggtctcaacaagaacaaacaaaaagacaatattataaactagagaatgtcaaca 1270 Query: 406 agactttagagatgttgaaaactgctgtgagtgctggcattccagtaaatctgatccctc 465 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1269 agactttagagatgttgaaaactgctgtgagtgctggcattccagtaaatctgatccctc 1210 Query: 466 aattattcaatagtgaccattctggtatggaaaccgaccctgcagatttacgtcatatga 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1209 aattattcaatagtgaccattctggtatggaaaccgaccctgcagatttacgtcatatga 1150 Query: 526 atcattctaaggagcaatctcccttattagcggtccctgacaagcagatgaaatcgtata 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1149 atcattctaaggagcaatctcccttattagcggtccctgacaagcagatgaaatcgtata 1090 Query: 586 agttccctcctgaaaaccagtctttgatgccgnctacatcaggtgctgaattgaaaactc 645 ||||||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||| Sbjct: 1089 agttccctcctgaaaaccagtctttgaggccgcctacaacaggtgctgaattgaaaactc 1030 Query: 646 atcgaagaacacattctcccgctagaatatgtgctgaagctgtggcagctcttaacagta 705 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1029 atcgaagaacacattctcccgctagaataggtgctgaagctgtggcagctcttaacagta 970 Query: 706 gtatggctcttaaaagataagaattgcatggtaatgatgatgaaaagcnngaaacgattg 765 |||||||||||||| | ||||||||||||||||||||||||||| || |||||||| Sbjct: 969 gtatggctcttaaagaaaaagaattgcatggtaatgatgatgaaaggcggaaaacgatt- 911 Query: 766 ggttctg-aaggcatatac-taaga-aatgatgtcattg-ccatcttc-aaaatg-atca 819 ||||||| ||||||||||| ||||| |||||||||| || |||||||| |||||| | || Sbjct: 910 ggttctgaaaggcatatacataagagaatgatgtcaatgcccatcttcaaaaatgaacca 851 Query: 820 acgactgnagtgttaaacttttc-gcttggcaaa-atattacggtcaaa 866 ||||||| ||||||||||||||| |||||||||| |||| ||||||||| Sbjct: 850 acgactggagtgttaaacttttcggcttggcaaacatataacggtcaaa 802 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6883 Number of Sequences: 1807 Number of extensions: 6883 Number of successful extensions: 36 Number of sequences better than 1.0e-20: 1 length of query: 946 length of database: 10,358,551 effective HSP length: 16 effective length of query: 930 effective length of database: 10,329,639 effective search space: 9606564270 effective search space used: 9606564270 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)