BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZA06FM1.SCF screened BAC_end (906 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1487 1271 0.0 3x_Contig1762 100 9e-21 3x_Contig1623 100 9e-21 3x_Contig17 100 9e-21 >3x_Contig1487 Length = 9002 Score = 1271 bits (641), Expect = 0.0 Identities = 754/786 (95%), Gaps = 5/786 (0%) Strand = Plus / Plus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccatataaaatt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5403 cgctaggctattaacccaaagcgagaatcataccactagaccacacgcccatataaaatt 5462 Query: 146 agttggatgttaagaagagaagtgattgatgtattccaaatgcaaagtcatagtattttt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5463 agttggatgttaagaagagaagtgattgatgtattccaaatgcaaagtcatagtattttt 5522 Query: 206 ttccaaacagccttggctgatacaggcactacagcactgaaagcataacaaatattatgt 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5523 ttccaaacagccttggctgatacaggcactacagcactgaaagcataacaaatattatgt 5582 Query: 266 gtactcctatgttcggtaccaatccgataatgtcgagatgcatacagggtacctagatgc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5583 gtactcctatgttcggtaccaatccgataatgtcgagatgcatacagggtacctagatgc 5642 Query: 326 acagccttctgtaaatatctgacacatatatatatataaatatgtatatgtgtcagatat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5643 acagccttctgtaaatatctgacacatatatatatataaatatgtatatgtgtcagatat 5702 Query: 386 tccgtcattggggggatacatattaaaaactctggacaactggtagcagcccagagaaca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5703 tccgtcattggggggatacatattaaaaactctggacaactggtagcagcccagagaaca 5762 Query: 446 caatgaagtatctgcttttactactactattactgtcctccatatgcacctgtaccccga 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5763 caatgaagtatctgcttttactactactattactgtcctccatatgcacctgtaccccga 5822 Query: 506 tactacctggcccctgccccaatgcaacttctatcctgtatccgatctctaataagaatt 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5823 tactacctggcccctgccccaatgcaacttctatcctgtatccgatctctaataagaatt 5882 Query: 566 ctcgaattcaatctctcatcgagagggtacttgtggccattagatagg-aacagaaacta 624 |||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||| Sbjct: 5883 ctcgaattcaatctctcatcgagagggtacttgtggccatagaaaaggaaacagaaacta 5942 Query: 625 atactacctcgacgacctcaattgaacccacgacatgcgacgaagtaacttggtataatg 684 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5943 atactacctcgacgacctcaattgaacccacgacatgcgacgaagtaacttggtataatg 6002 Query: 685 tcgtatatcatggattattttggaganaaatcggtctgcactgnattgtaagaactgcct 744 ||||||||||||||||| |||||||| || | ||||||||| ||||||| |||||| Sbjct: 6003 tcgtatatcatggatta-tttggagagaagcggttctgcactgatgtgtaagacctgcct 6061 Query: 745 gccaatacaccagaccatgatttctttcccataatatgaaaatataataatttgagtntt 804 |||||||||||||| |||||||||||||| |||||||||| | |||||||| ||||| | Sbjct: 6062 gccaatacaccagagcatgatttctttccaataatatgaata-ataataatatgagta-t 6119 Query: 805 atgggtagcagaaaatccgattcttcaaacataatacatactattctgtttcgccaaccg 864 || | ||||| ||||| || ||||||||||||||||||||| ||||||||| || ||| Sbjct: 6120 attgttagcaagaaatcgaatccttcaaacataatacatacta-tctgtttcgtcagccg 6178 Query: 865 gcatag 870 |||||| Sbjct: 6179 gcatag 6184 >3x_Contig1762 Length = 22098 Score = 99.6 bits (50), Expect = 9e-21 Identities = 50/50 (100%) Strand = Plus / Minus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 135 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6159 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 6110 >3x_Contig1623 Length = 14379 Score = 99.6 bits (50), Expect = 9e-21 Identities = 50/50 (100%) Strand = Plus / Plus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 135 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 7079 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 7128 >3x_Contig17 Length = 819 Score = 99.6 bits (50), Expect = 9e-21 Identities = 50/50 (100%) Strand = Plus / Plus Query: 86 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 135 |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 209 cgctaggctattaacccaaagcgagaatcataccactagaccacacgccc 258 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8634 Number of Sequences: 1807 Number of extensions: 8634 Number of successful extensions: 515 Number of sequences better than 1.0e-20: 4 length of query: 906 length of database: 10,358,551 effective HSP length: 16 effective length of query: 890 effective length of database: 10,329,639 effective search space: 9193378710 effective search space used: 9193378710 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)