BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZA06RM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1695 975 0.0 >3x_Contig1695 Length = 14630 Score = 975 bits (492), Expect = 0.0 Identities = 564/580 (97%), Gaps = 6/580 (1%) Strand = Plus / Plus Query: 49 gagatctttgtccttcgctgtacttgagttatcttcttcatactttgcaataaatcatct 108 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 10999 gagatctttgtccttcgctgtacttgagttatcttcttcagactttgcaataaatcatct 11058 Query: 109 aactgtaataatgaaacataacaaagatcgtcaaacgccaattgagatataaccacattc 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11059 aactgtaataatgaaacataacaaagatcgtcaaacgccaattgagatataaccacattc 11118 Query: 169 ttattaagtgtcttcaattgcaatagtacggcctgtgcaaacaagcgttccatcggattg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11119 ttattaagtgtcttcaattgcaatagtacggcctgtgcaaacaagcgttccatcggattg 11178 Query: 229 gcatgaggtacctcatttagattaggtaacttatctagtcgcacacgtctctggtcagtc 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11179 gcatgaggtacctcatttagattaggtaacttatctagtcgcacacgtctctggtcagtc 11238 Query: 289 tctatcttggcatcgtttttatctttatcctcagaagtcgtcatattcagtctcaaagag 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11239 tctatcttggcatcgtttttatctttatcctcagaagtcgtcatattcagtctcaaagag 11298 Query: 349 ccaactagtactttaatattgtatgagtgctttactattcggtcagtttcatacccatag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11299 ccaactagtactttaatattgtatgagtgctttactattcggtcagtttcatacccatag 11358 Query: 409 gatgaaactgattgattgctttaacccttaagagctaagcgtttggagacgtctctcgca 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11359 gatgaaactgattgattgctttaacccttaagagctaagcgtttggagacgtctctcgca 11418 Query: 469 ataac-tcaatgcttcaactcattcattcagagttttcgaatggcataacgttcgggtaa 527 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 11419 ataacttcaatgcttcaactcattcattcagagttttcgaatggcataacgttcgggtaa 11478 Query: 528 taccgttattatttttcacgctgatttgcgtgaaactgagttaaatatcatcaagaattg 587 ||||||||||| |||||||| ||||||||||| |||||| | |||| |||||||| | | Sbjct: 11479 taccgttatta-ttttcacg-tgatttgcgtg-aactgatgttaataacatcaagagtag 11535 Query: 588 attaagttttcccgaggtgggacgaaaacaacccggcgaa 627 || ||| || | |||||| ||||||||||||||||||||| Sbjct: 11536 ataaag-ttacacgaggt-ggacgaaaacaacccggcgaa 11573 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6443 Number of Sequences: 1807 Number of extensions: 6443 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)