BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZA08FM1.SCF screened BAC_end (904 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1436 1187 0.0 >3x_Contig1436 Length = 9951 Score = 1187 bits (599), Expect = 0.0 Identities = 652/666 (97%), Gaps = 3/666 (0%) Strand = Plus / Plus Query: 91 ccagatggtactttaacctccttaccagcatcttcgccccataaatcaagggatcctgac 150 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5354 ccagatggtactttaacctccttaccagcatcttcgccccataaatcaagggatcctgac 5413 Query: 151 ttcacaagaccttcttttgcaactcttgctttcaacttactttcaccaatttttttacca 210 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5414 ttcacaagaccttcttttgcaactcttgctttcaacttactttcaccaatttttttacca 5473 Query: 211 gctaaagcaagtaatctgtccagttctttctttgataccccttggatcttatcatgtttc 270 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5474 gctaaagcaagtaatctgtccagttctttctttgataccccttggatcttatcatgtttc 5533 Query: 271 ttgttagcagtctttgggttggttagagcaggcactttggatttagacttgatagactcc 330 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5534 ttgttagcagtctttgggttggttagagcaggcactttggatttagacttgatagactcc 5593 Query: 331 aaaatctcggttgacttcagagttttcttgattgctttcctcttcactaatttctgcttt 390 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5594 aaaatctcggttgacttcagagttttcttgattgctttcctcttcactaatttctgcttt 5653 Query: 391 aaaacttggtcaccctcagtatcaaccgcaaaaagcgcatcatcgctaagttctgtcaaa 450 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5654 aaaacttggtcaccctcagtatcaaccgcaaaaagcgcatcatcgctaagttctgtcaaa 5713 Query: 451 ttctgcttaccatgagtagtctcaaggatctgcttctcttcgagcttgcgttccacatcg 510 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5714 ttctgcttaccatgagtagtctcaaggatctgcttctcttcgagcttgcgttccacatcg 5773 Query: 511 cttatatcaatattctttctccatgccttcttacctttacgagaagaatgtttgtactga 570 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5774 cttatatcaatattctttctccatgccttcttacctttacgagaagattgtttgtactga 5833 Query: 571 gctggtctgtccttagatcccgccataactaactattttgtctgtttgtttgaggtggat 630 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5834 gctggtctgtccttagatcccgccataactaactattttgtctgtttgtttgaggtggat 5893 Query: 631 tgncttgaat-gtat-gtaaggatttattaaacgatacgccagtccccgagtattaattg 688 || | ||||| |||| ||||||||| | ||||||||||||||||||||||||||||||| Sbjct: 5894 tgtcctgaatagtatggtaaggattagtaaaacgatacgccagtccccgagtattaattg 5953 Query: 689 gggacttgaattcatctcatcgcatggcatttcatctcttttttttttttttcatcttat 748 | |||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||| Sbjct: 5954 tgtacttgaattcatctcatcgcatcgcatctcatctc-tttttttttttttcatcttat 6012 Query: 749 gggcat 754 ||||| Sbjct: 6013 tggcat 6018 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 20,876 Number of Sequences: 1807 Number of extensions: 20876 Number of successful extensions: 415 Number of sequences better than 1.0e-20: 1 length of query: 904 length of database: 10,358,551 effective HSP length: 16 effective length of query: 888 effective length of database: 10,329,639 effective search space: 9172719432 effective search space used: 9172719432 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)