BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZB03RM1.SCF screened BAC_end
         (938 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1749                                                        1269   0.0  

>3x_Contig1749 
          Length = 22923

 Score = 1269 bits (640), Expect = 0.0
 Identities = 785/820 (95%), Gaps = 10/820 (1%)
 Strand = Plus / Minus

                                                                         
Query: 52    atttgatgatcttgatgataatgaagagatgatgagatgtctgtacatctcaagactgtc 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21221 atttgatgatcttgatgataatgaagagatgatgagatgtctgtacatctcaagactgtc 21162

                                                                         
Query: 112   caagtaccaacaccagacggaaattgaacatgctcgtaaagttctctctgataagtatta 171
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21161 caagtaccaacaccagacggaaattgaacatgctcgtaaagttctctctgataagtatta 21102

                                                                         
Query: 172   tttgaaagataatcggactgtcttgttggctgagatagaacttttgaataaccaatccaa 231
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21101 tttgaaagataatcggactgtcttgttggctgagatagaacttttgaataaccaatccaa 21042

                                                                         
Query: 232   gtttactcagtgtatgaaattatgtgaacaagttctcgaagtcgatgagtataaccttga 291
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21041 gtttactcagtgtatgaaattatgtgaacaagttctcgaagtcgatgagtataaccttga 20982

                                                                         
Query: 292   agttctaccaatctatatacaatgtttgcattcgttcgcagccaagaacaaattgtttct 351
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20981 agttctaccaatctatatacaatgtttgcattcgttcgcagccaagaacaaattgtttct 20922

                                                                         
Query: 352   cctttcacacaaattggcagaaaacttccccaaatcaccagtgacatggttcgcagttgc 411
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20921 cctttcacacaaattggcagaaaacttccccaaatcaccagtgacatggttcgcagttgc 20862

                                                                         
Query: 412   tacctactacctttgtatggggaaagtttcagaagcaaggaaatatttttctcgttcttc 471
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20861 tacctactacctttgtatggggaaagtttcagaagcaaggaaatatttttctcgttcttc 20802

                                                                         
Query: 472   aataatggatccaagttttgggtactcttggcttggttttgctcatacttacgtcgctga 531
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20801 aataatggatccaagttttgggtactcttggcttggttttgctcatacttacgtcgctga 20742

                                                                         
Query: 532   tggagaacatgaacaagcattatcagcatattccactgctgctagatttttccctgggac 591
              |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 20741 gggagaacatgaacaagcattatcagcatattccactgctgctagatttttccctggaac 20682

                                                                         
Query: 592   acatctaccacatctttatctcggnaatgc-atacaatagaatggatgacctatctcttt 650
             |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 20681 acatctaccacatctttatctcgg-aatgcaatacaatagaatggatgacctatctc-tt 20624

                                                                         
Query: 651   gccg-agaata-ttcatgatggcatatgacatgtgccccactgatcccctattactt-at 707
             |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 20623 gccgaagaatatttcatgatggcatatgacatgtgccccactgatcccctattacttaat 20564

                                                                         
Query: 708   gagttggggtgtcatttatttcaggagggcaaact-cctcaaagcttagaagtactggaa 766
             ||||| ||||||||| ||||||| ||||  ||||| | |||||||| ||||||||  |||
Sbjct: 20563 gagtt-gggtgtcatatatttcaagaggcaaaactacatcaaagctaagaagtacatgaa 20505

                                                                         
Query: 767   acgtgcccacgatgccattaagattttgaaatccggaagttaagccttggattttgattg 826
             |||||| |||||||| || |||| | ||||||| | |||| ||| ||||||| | |||||
Sbjct: 20504 acgtgcacacgatgcaataaagaatatgaaatcagaaagtaaag-cttggatatcgattg 20446

                                                     
Query: 827   ggattaatttggggtccaccttacaggaaacttggtgagg 866
              ||| ||||| |||||   |||||||||||||||||||||
Sbjct: 20445 tgataaattt-gggtcacacttacaggaaacttggtgagg 20407


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6643
Number of Sequences: 1807
Number of extensions: 6643
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 938
length of database: 10,358,551
effective HSP length: 16
effective length of query: 922
effective length of database: 10,329,639
effective search space: 9523927158
effective search space used: 9523927158
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)