BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZB03RM1.SCF screened BAC_end (938 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1749 1269 0.0 >3x_Contig1749 Length = 22923 Score = 1269 bits (640), Expect = 0.0 Identities = 785/820 (95%), Gaps = 10/820 (1%) Strand = Plus / Minus Query: 52 atttgatgatcttgatgataatgaagagatgatgagatgtctgtacatctcaagactgtc 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21221 atttgatgatcttgatgataatgaagagatgatgagatgtctgtacatctcaagactgtc 21162 Query: 112 caagtaccaacaccagacggaaattgaacatgctcgtaaagttctctctgataagtatta 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21161 caagtaccaacaccagacggaaattgaacatgctcgtaaagttctctctgataagtatta 21102 Query: 172 tttgaaagataatcggactgtcttgttggctgagatagaacttttgaataaccaatccaa 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21101 tttgaaagataatcggactgtcttgttggctgagatagaacttttgaataaccaatccaa 21042 Query: 232 gtttactcagtgtatgaaattatgtgaacaagttctcgaagtcgatgagtataaccttga 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21041 gtttactcagtgtatgaaattatgtgaacaagttctcgaagtcgatgagtataaccttga 20982 Query: 292 agttctaccaatctatatacaatgtttgcattcgttcgcagccaagaacaaattgtttct 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20981 agttctaccaatctatatacaatgtttgcattcgttcgcagccaagaacaaattgtttct 20922 Query: 352 cctttcacacaaattggcagaaaacttccccaaatcaccagtgacatggttcgcagttgc 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20921 cctttcacacaaattggcagaaaacttccccaaatcaccagtgacatggttcgcagttgc 20862 Query: 412 tacctactacctttgtatggggaaagtttcagaagcaaggaaatatttttctcgttcttc 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20861 tacctactacctttgtatggggaaagtttcagaagcaaggaaatatttttctcgttcttc 20802 Query: 472 aataatggatccaagttttgggtactcttggcttggttttgctcatacttacgtcgctga 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 20801 aataatggatccaagttttgggtactcttggcttggttttgctcatacttacgtcgctga 20742 Query: 532 tggagaacatgaacaagcattatcagcatattccactgctgctagatttttccctgggac 591 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 20741 gggagaacatgaacaagcattatcagcatattccactgctgctagatttttccctggaac 20682 Query: 592 acatctaccacatctttatctcggnaatgc-atacaatagaatggatgacctatctcttt 650 |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| || Sbjct: 20681 acatctaccacatctttatctcgg-aatgcaatacaatagaatggatgacctatctc-tt 20624 Query: 651 gccg-agaata-ttcatgatggcatatgacatgtgccccactgatcccctattactt-at 707 |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 20623 gccgaagaatatttcatgatggcatatgacatgtgccccactgatcccctattacttaat 20564 Query: 708 gagttggggtgtcatttatttcaggagggcaaact-cctcaaagcttagaagtactggaa 766 ||||| ||||||||| ||||||| |||| ||||| | |||||||| |||||||| ||| Sbjct: 20563 gagtt-gggtgtcatatatttcaagaggcaaaactacatcaaagctaagaagtacatgaa 20505 Query: 767 acgtgcccacgatgccattaagattttgaaatccggaagttaagccttggattttgattg 826 |||||| |||||||| || |||| | ||||||| | |||| ||| ||||||| | ||||| Sbjct: 20504 acgtgcacacgatgcaataaagaatatgaaatcagaaagtaaag-cttggatatcgattg 20446 Query: 827 ggattaatttggggtccaccttacaggaaacttggtgagg 866 ||| ||||| ||||| ||||||||||||||||||||| Sbjct: 20445 tgataaattt-gggtcacacttacaggaaacttggtgagg 20407 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6643 Number of Sequences: 1807 Number of extensions: 6643 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 938 length of database: 10,358,551 effective HSP length: 16 effective length of query: 922 effective length of database: 10,329,639 effective search space: 9523927158 effective search space used: 9523927158 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)