BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZB07FM1.SCF screened BAC_end (936 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1643 1199 0.0 >3x_Contig1643 Length = 10865 Score = 1199 bits (605), Expect = 0.0 Identities = 659/672 (98%), Gaps = 4/672 (0%) Strand = Plus / Plus Query: 85 atttcttccaatttcaaattggccaacggtactgagtatactcttaccggtattgctaag 144 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3049 atttcttccaatttcaaattggccaacggtactgagtatactcttaccggtattgctaag 3108 Query: 145 ggtgccggtatgatttgccctaacatggctacattgttgggattcatcgttaccgatttg 204 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3109 ggtgccggtatgatttgccctaacatggctacattgttgggattcatcgttaccgatttg 3168 Query: 205 ccaatcactccatctgcattgcaaaaaatgttgcgttccgccactgatcgttcctttaac 264 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3169 ccaatcactccatctgcattgcaaaaaatgttgcgttccgccactgatcgttcctttaac 3228 Query: 265 tgtatttcagtagatggtgatatgagtactaacgacactatcagtatgcttgccaacggt 324 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3229 tgtatttcagtagatggtgatatgagtactaacgacactatcagtatgcttgccaacggt 3288 Query: 325 gctgtcgatacagctgttattgatgaaaacagtcaggattttgttcaagtacaaactcaa 384 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3289 gctgtcgatacagctgttattgatgaaaacagtcaggattttgttcaagtacaaactcaa 3348 Query: 385 gtaacagaatttgcccaacggttggcacaattagttgtccgtgatggtgaaggatccacc 444 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3349 gtaacagaatttgcccaacggttggcacaattagttgtccgtgatggtgaaggatccacc 3408 Query: 445 aaatttgttactgttaacgtcaagaacgccttgaatttcaaagatgctaagattatagcg 504 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3409 aaatttgttactgttaacgtcaagaacgccttgaatttcaaagatgctaagattatagcg 3468 Query: 505 gaatctatttctaattctatgttggttaaaaccgctttatatggtcaagacgctaactgg 564 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3469 gaatctatttctaattctatgttggttaaaaccgctttatatggtcaagacgctaactgg 3528 Query: 565 ggcagaattctttgtgctattggatacgctaaattggacaacctacaatcttt-gatgat 623 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 3529 ggcagaattctttgtgctattggatacgctaaattggacaacctacaatctttagatgat 3588 Query: 624 -aaaagatcaatgtgtnctttgttgctactgataattcggaaccaaaggagttgaaacta 682 ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 3589 aaaaagatcaatgtgtcctttgttgctactgataattcggaaccaaaggagttgaagcta 3648 Query: 683 atcggtgatggtggtacaac-acttgatattgatgagccaagagcatttgaaccttttgc 741 |||| ||||||| |||| || ||||||||||||||| ||||||||| ||||| ||| || Sbjct: 3649 atcgttgatggt-gtaccacaacttgatattgatgaagcaagagcatctgaacttttggc 3707 Query: 742 acaacaagactt 753 |||||||||||| Sbjct: 3708 acaacaagactt 3719 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6552 Number of Sequences: 1807 Number of extensions: 6552 Number of successful extensions: 43 Number of sequences better than 1.0e-20: 1 length of query: 936 length of database: 10,358,551 effective HSP length: 16 effective length of query: 920 effective length of database: 10,329,639 effective search space: 9503267880 effective search space used: 9503267880 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)