BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZB08FM1.SCF screened BAC_end (932 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig390 924 0.0 >3x_Contig390 Length = 1860 Score = 924 bits (466), Expect = 0.0 Identities = 466/466 (100%) Strand = Plus / Minus Query: 86 cgttagtgcgtacatttgaaaagaacttgatgcttcatctctatcctcgtacgtcaattg 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 468 cgttagtgcgtacatttgaaaagaacttgatgcttcatctctatcctcgtacgtcaattg 409 Query: 146 acgttcaagttcatgctctacagttagatggtgggattcttggggcaatgcttaatggaa 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 408 acgttcaagttcatgctctacagttagatggtgggattcttggggcaatgcttaatggaa 349 Query: 206 taacattggctctgatagatgctggtatcgcaatgtatgattttgtaagcggggtttcag 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 348 taacattggctctgatagatgctggtatcgcaatgtatgattttgtaagcggggtttcag 289 Query: 266 tgggactttatgatactacaccactactagaccttaactcgcttgaggaaaatgcaatga 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 288 tgggactttatgatactacaccactactagaccttaactcgcttgaggaaaatgcaatga 229 Query: 326 gcagtgttaccataggcacaattggtaaatcagaaaaattatctttattaatggtggaag 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 228 gcagtgttaccataggcacaattggtaaatcagaaaaattatctttattaatggtggaag 169 Query: 386 ataaagtgcctttggatagacttgagagtgtcatggccatcggaatagcaggcactcaca 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 168 ataaagtgcctttggatagacttgagagtgtcatggccatcggaatagcaggcactcaca 109 Query: 446 gaattagagatttaatggataaggagcttagaaagcatggaaaaacaagagttgaaaact 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 108 gaattagagatttaatggataaggagcttagaaagcatggaaaaacaagagttgaaaact 49 Query: 506 cttcgaattgatttttaaaccattaattataaacttcacataacat 551 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 48 cttcgaattgatttttaaaccattaattataaacttcacataacat 3 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7146 Number of Sequences: 1807 Number of extensions: 7146 Number of successful extensions: 60 Number of sequences better than 1.0e-20: 1 length of query: 932 length of database: 10,358,551 effective HSP length: 16 effective length of query: 916 effective length of database: 10,329,639 effective search space: 9461949324 effective search space used: 9461949324 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)