BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZB08RM1.SCF screened BAC_end (903 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig343 777 0.0 >3x_Contig343 Length = 1398 Score = 777 bits (392), Expect = 0.0 Identities = 453/473 (95%), Gaps = 1/473 (0%) Strand = Plus / Plus Query: 333 ttggcaaacatatattgtcaataaattatcctggcgtttctaac-ttatacataaatcta 391 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1 ttggcaaacatatattgtcaataaattatcctggcgtttctaaccttatacataaatcta 60 Query: 392 gcgattcacaattcattatatagaatttatgatttgaataaaaacgttacctttcttgaa 451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 61 gcgattcacaattcattatatagaatttatgatttgaataaaaacgttacctttcttgaa 120 Query: 452 tccgattttccagagaataccaacactatgttcaagtactcatcctaaccgagcaggtag 511 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 tccgattttccagagaataccaacactatgttcaagtactcatcctaaccgagcaggtag 180 Query: 512 tagtgaagatctacatactttcatcagcgttcatttttgtattcaggatatcggtttctt 571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 tagtgaagatctacatactttcatcagcgttcatttttgtattcaggatatcggtttctt 240 Query: 572 gtgtttcctgcatgatccatttccatatattntcgaaacanaggattatttgtataaaga 631 ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct: 241 gtgtttcctgcatgatccatttccatatattttcgaaacaaaggattatttgtataaaga 300 Query: 632 aaagaacttggcacgaatcctaaacgattaaacataaacgacatcaaattacaatgacca 691 || ||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct: 301 aaggaacttggcacgaatcctaaacgattaaacaaaaacgacaacaaattacaatgacca 360 Query: 692 ctggccgatcgtgccgnctgggaatcatcattttttacaggaatacggcggaattcattt 751 |||||||||||||||| |||| ||||||||||||| ||||| |||||| ||| || | Sbjct: 361 ctggccgatcgtgccgcctggaaatcatcatttttacaaggaaaacggcgaaatcaatat 420 Query: 752 catagtacttgacagttgtctctgcaagaataaatgggacaaccacccttcga 804 ||||||||| |||||||||||||||||||| |||||||||||| | ||||||| Sbjct: 421 catagtactagacagttgtctctgcaagaagaaatgggacaacaaaccttcga 473 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7017 Number of Sequences: 1807 Number of extensions: 7017 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 903 length of database: 10,358,551 effective HSP length: 16 effective length of query: 887 effective length of database: 10,329,639 effective search space: 9162389793 effective search space used: 9162389793 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)