BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZC03RM1.SCF screened BAC_end (961 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1640 1411 0.0 >3x_Contig1640 Length = 15521 Score = 1411 bits (712), Expect = 0.0 Identities = 804/826 (97%), Gaps = 7/826 (0%) Strand = Plus / Minus Query: 47 taccatctgcatgatacttggaggttcattcgattctggatcaat-aacttcttttctcg 105 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 2019 taccatctgcatgatacttggaggttcattcgattctggatcaattaacttcttttctcg 1960 Query: 106 catgatactgttaagattttccaaggattccacaatagatggatgggaatgaatctcgtc 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1959 catgatactgttaagattttccaaggattccacaatagatggatgggaatgaatctcgtc 1900 Query: 166 cataagtttctgtactttgacatgagcatccagatcctcgggtgatttgtcccatgacga 225 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1899 cataagtgtctgtactttgacatgagcatccagatcctcgggtgatttgtcccatgacga 1840 Query: 226 agcatatctcttgttttgtagaagaggaatgattgttctacaacttctttgagcagtaac 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1839 agcatatctcttgttttgtagaagaggaatgattgttctacaacttctttgagcagtaac 1780 Query: 286 tgctccaaatgtggcagctcttatcccataacggaatacagaacgcgataacatgttttc 345 ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1779 tgctccaaatgtggcagctcttagcccagaacggaatacagaacgcgataacatgttttc 1720 Query: 346 tatatgaggattattgaagttccacagcaacaggaccggttaggtctcggatattctata 405 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1719 tatatgaggattattgaagttccacagcaacaggaccggttaggtctcggatattctata 1660 Query: 406 ttttcttaatttagtatgcaagcggaaagataattgcgctttcacatttttttgaagttg 465 || ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1659 ttgtctgaatttagtatgcaagcggaaagataattgcgctttcacatttttttgaagttg 1600 Query: 466 ataaaatttcagaccttaacatgatggactgttatcgaacaggagtctgaaggtaataat 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1599 ataaaatttcagaccttaacatgatggactgttatcgaacaggagtctgaaggtaataat 1540 Query: 526 tgaaggtgagcaccgactattttcatttgagcttgcaatatataaacaaatcgaactaca 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1539 tgaaggtgagcaccgactattttcatttgagcttgcaatatataaacaaatcgaactaca 1480 Query: 586 atgaattcaacaccatctgtagagtatttaccatagatacgattcttaattgtgatatta 645 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1479 atgaattcaacaccatctgtagagtatttaccatagatacgattcttaattgtgatatta 1420 Query: 646 canacttggtcatttatacatgaaatactagttagcccgaagaatgtatgatgtagattt 705 || |||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct: 1419 caactttggtcatttatacatgaaatactagttagccggaagaatgtatgatgtagaatt 1360 Query: 706 ggcggatgctatgtgtacacatctagctagcaatgatat-acgaaaga-ttttagtgctt 763 |||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1359 ggcggatgctatgtgtacacatctagctagcaatgaaataacgaaagagttttagtgctt 1300 Query: 764 gatcactgccatcatcatgctgctttagtgtatcatatgcccaaggctatcttcgtaaaa 823 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 1299 gatcactgccatcatcatgctgctttagtgtatcatatg-ccaaggctatcttcgtaaaa 1241 Query: 824 tttcaagttgaggattttcanctacgaggaacttccatctattacc 869 ||||| ||| || ||||| |||||| |||||||||||||||||| Sbjct: 1240 -ttcaaagtga-gaatttcaactacga-gaacttccatctattacc 1198 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7030 Number of Sequences: 1807 Number of extensions: 7030 Number of successful extensions: 52 Number of sequences better than 1.0e-20: 1 length of query: 961 length of database: 10,358,551 effective HSP length: 16 effective length of query: 945 effective length of database: 10,329,639 effective search space: 9761508855 effective search space used: 9761508855 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)