BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZC07FM1.SCF screened BAC_end (913 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1155 1013 0.0 >3x_Contig1155 Length = 6106 Score = 1013 bits (511), Expect = 0.0 Identities = 528/533 (99%), Gaps = 1/533 (0%) Strand = Plus / Plus Query: 86 ccaaaggaaaaatgggctgtcgccacctccggtacttacgaaatggctcacaaatggttt 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5575 ccaaaggaaaaatgggctgtcgccacctccggtacttacgaaatggctcacaaatggttt 5634 Query: 146 gacatcttgggaatcaagagaccttctaactttatcaccgctaacgatgtcaagaacggt 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5635 gacatcttgggaatcaagagaccttctaactttatcaccgctaacgatgtcaagaacggt 5694 Query: 206 aagcctcatccagaaccttatttaaagggcagaaacggtttgtcttacccaatcaacaaa 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5695 aagcctcatccagaaccttatttaaagggcagaaacggtttgtcttacccaatcaacaaa 5754 Query: 266 gaaaacccagccgcttcaaaggttattgtctttgaagatgctccagcaggtatcttggcc 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5755 gaaaacccagccgcttcaaaggttattgtctttgaagatgctccagcaggtatcttggcc 5814 Query: 326 ggtaaagctgctggctgtaagatcgttggtattgccactactttcgacaaggaattcttg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5815 ggtaaagctgctggctgtaagatcgttggtattgccactactttcgacaaggaattcttg 5874 Query: 386 atcgaaaagggttgcgatatcgtcatcaaggaccacaccaagttgagagttgctgcctac 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5875 atcgaaaagggttgcgatatcgtcatcaaggaccacaccaagttgagagttgctgcctac 5934 Query: 446 caccctgaaaccgatgaagttgaattcatctttgacgaatacttatatgccaaggatgat 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5935 caccctgaaaccgatgaagttgaattcatctttgacgaatacttatatgccaaggatgat 5994 Query: 506 ctacttgaatggtaattttcgtagaaccgcagttctcaatccattttgtatattangagt 565 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| Sbjct: 5995 ctacttgaatggtaattntcgtagaaccgcagttctcaatccattttgtatattaggagt 6054 Query: 566 tgatgtgatgtttgaataaaagaacagtgattgattatctctacaggcaatga 618 |||||||||||| ||||||||| |||||||||||| ||||||||||||||||| Sbjct: 6055 tgatgtgatgttggaataaaag-acagtgattgataatctctacaggcaatga 6106 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8152 Number of Sequences: 1807 Number of extensions: 8152 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 913 length of database: 10,358,551 effective HSP length: 16 effective length of query: 897 effective length of database: 10,329,639 effective search space: 9265686183 effective search space used: 9265686183 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)