BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZC10FM1.SCF screened BAC_end (917 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1657 1209 0.0 >3x_Contig1657 Length = 14558 Score = 1209 bits (610), Expect = 0.0 Identities = 638/646 (98%), Gaps = 1/646 (0%) Strand = Plus / Plus Query: 87 agtgaacgggataaaaactgagggagatgctattaggttacttgatgtggattttaacat 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5541 agtgaacgggataaaaactgagggagatgctattaggttacttgatgtggattttaacat 5600 Query: 147 gagcgttgaggtaaatgaatgccagcctagttccacagttaccgttgatttataatcatg 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5601 gagcgttgaggtaaatgaatgccagcctagttccacagttaccgttgatttataatcatg 5660 Query: 207 gagtctgtgaaacatacatacattatttttgtttagtatataaggaacgcatcacttctg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5661 gagtctgtgaaacatacatacattatttttgtttagtatataaggaacgcatcacttctg 5720 Query: 267 gaccctctcttgttctgcaatataaaccttgcatatagactcgttataggcaaggcaagt 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5721 gaccctctcttgttctgcaatataaaccttgcatatagactcgttataggcaaggcaagt 5780 Query: 327 aaacatatataggttgctcggaatcgtactcgtaaaaagactagttcgaaacaatggcta 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5781 aaacatatataggttgctcggaatcgtactcgtaaaaagactagttcgaaacaatggcta 5840 Query: 387 caggtatttccaagactttgaaatataacgcacaaacggataagttaatcacttttgcag 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5841 caggtatttccaagactttgaaatataacgcacaaacggataagttaatcacttttgcag 5900 Query: 447 ctggctgcttctggggtactcaacacatctttttgaagcatttcggggacaagatcattg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5901 ctggctgcttctggggtactcaacacatctttttgaagcatttcggggacaagatcattg 5960 Query: 507 atggcaaagttggatattctaatggatccgaaagtctgaaagacaaaccagatacagttt 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5961 atggcaaagttggatattctaatggatccgaaagtctgaaagacaaaccagatacagttt 6020 Query: 567 cttacgaacgtgtcaagaagggtgataccggcttcgctgaagtttatcaaatctcataca 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6021 cttacgaacgtgtcaagaagggtgataccggcttcgctgaagtttatcaaatctcataca 6080 Query: 627 atccttagctggtatcttttgaaggagcttgtagacttcttttttcgtattcatgatcct 686 ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 6081 atcctaagctggtatc-tttgaaggagcttgtagacttctttttccgtattcatgatcct 6139 Query: 687 actaccggaaatgctcaaggccctgatcaaggtattcaattccgta 732 ||||| | ||||||||| |||||||||||||||| ||||| ||||| Sbjct: 6140 actacggtaaatgctcagggccctgatcaaggtagtcaataccgta 6185 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6740 Number of Sequences: 1807 Number of extensions: 6740 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 917 length of database: 10,358,551 effective HSP length: 16 effective length of query: 901 effective length of database: 10,329,639 effective search space: 9307004739 effective search space used: 9307004739 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)