BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZD05FM1.SCF screened BAC_end (918 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1420 1558 0.0 >3x_Contig1420 Length = 8324 Score = 1558 bits (786), Expect = 0.0 Identities = 823/830 (99%), Gaps = 4/830 (0%) Strand = Plus / Minus Query: 87 cacggcgttcttgtattttggagcaccttcgacagggtttagatgttgtgcttgtaatct 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2736 cacggcgttcttgtattttggagcaccttcgacagggtttagatgttgtgcttgtaatct 2677 Query: 147 aatcttcacgacttccatcggattgacaacgacgacagcctcggtgatacctgcaccgac 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2676 aatcttcacgacttccatcggattgacaacgacgacagcctcggtgatacctgcaccgac 2617 Query: 207 accagcaatgaaagtgttaccagtagaaactttaccagtttccttatcagcaagcaaagt 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2616 accagcaatgaaagtgttaccagtagaaactttaccagtttccttatcagcaagcaaagt 2557 Query: 267 tctatagaactcataagatgagaatctaatagccatctttggtgtgataccgatgacgac 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2556 tctatagaactcataagatgagaatctaatagccatctttggtgtgataccgatgacgac 2497 Query: 327 agcacctaaacctttgtaaaatgccaagaaaccttcatttctatagatttcaccaccagt 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2496 agcacctaaacctttgtaaaatgccaagaaaccttcatttctatagatttcaccaccagt 2437 Query: 387 cttgatgaaacctggtgcttttacaccggaaccaacagcatttttgtagatctgcattct 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2436 cttgatgaaacctggtgcttttacaccggaaccaacagcatttttgtagatctgcattct 2377 Query: 447 aaccttgatggtatccaatggatggcaacatagaccttccattagacccgcaccaccgcc 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2376 aaccttgatggtatccaatggatggcaacatagaccttccattagacccgcaccaccgcc 2317 Query: 507 agcaatcaaattgacagctgggtttgaagatttttgtttcgaagccatttctgtagaatg 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2316 agcaatcaaattgacagctgggtttgaagatttttgtttcgaagccatttctgtagaatg 2257 Query: 567 atgtgatataattcaaaataaaaagacgaaaagatctgtaaaccgactgtgcgaatataa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2256 atgtgatataattcaaaataaaaagacgaaaagatctgtaaaccgactgtgcgaatataa 2197 Query: 627 atatacacgttattattctcttctagttgtcttttggcagtatttaatacctcaaacaaa 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2196 atatacacgttattattctcttctagttgtcttttggcagtatttaatacctcaaacaaa 2137 Query: 687 caaatatgacgactttttaaagctatctttatctgtgattcacctttaaagggaaacgat 746 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 2136 caaatatgacgactttttaaagctatctttatctgtgattcacctttaaggggaaacga- 2078 Query: 747 gat-aatatgcaaaaaattcagatacgaattcagatataagttagttgaaatcccaagta 805 ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 2077 gataaatatgcaaaaaattcagaaacgaattcagatataagttagttgaaatcccaagta 2018 Query: 806 tcaaactcaattaataccccacatttatatatcttattcctaaaattcaaaagtttaaag 865 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2017 tcaaactcaattaaaaccccacatttatatatcttattcctaaaattcaaaagtttaaag 1958 Query: 866 aa-tgtaaatctatgttataagtaaaacccgtaaaaagacccgaaattaa 914 || |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 1957 aattgtaaatctatgttataagtaaaacccgtaaaaaga-ccgaaattaa 1909 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7231 Number of Sequences: 1807 Number of extensions: 7231 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 918 length of database: 10,358,551 effective HSP length: 16 effective length of query: 902 effective length of database: 10,329,639 effective search space: 9317334378 effective search space used: 9317334378 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)