BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZD12RM1.SCF screened BAC_end (966 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig634 1051 0.0 >3x_Contig634 Length = 1748 Score = 1051 bits (530), Expect = 0.0 Identities = 546/550 (99%), Gaps = 1/550 (0%) Strand = Plus / Minus Query: 46 cttctatactatggcagaggagctgaaaggatttcctcatgagagactatctatctcatt 105 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 549 cttctatactatggcagaggagctgaaaggatttcctcatgagagactatctatctcatt 490 Query: 106 gaggagtaattcacagcaatatcaagatattcttttgttttttgatgattatcagtttga 165 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 489 gaggagtaattcacagcaatatcaagatattcttttgttttttgatgattatcagtttga 430 Query: 166 tttggatagcaccaaccagcacttgtgtagtctggcagaattactgttaaagtctcatac 225 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 429 tttggatagcaccaaccagcacttgtgtagtctggcagaattactgttaaagtctcatac 370 Query: 226 actgttggcagagctgttttctgatgatgtgagcgtttctcaactcttaccgtattttga 285 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 369 actgttggcagagctgttttctgatgatgtgagcgtttctcaactcttaccgtattttga 310 Query: 286 ttggattcaagatggaagatctgaattttatcagctcttcaacgggataaagaccatcga 345 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 309 ttggattcaagagggaagatctgaattttatcagctcttcaacgggataaagaccatcga 250 Query: 346 aaaggtgttgctgcatctgatggaaatcatcgaagatgaatttgggtgtaatgaagatga 405 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 249 aaaggtgttgctgcatctgatggaaatcatcgaagaggaatttgggtgtaatgaagatga 190 Query: 406 actattccagaaagagttgactgcactttttgatttattagaggagatatcagatacatt 465 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 actattccagaaggagttgactgcactttttgatttattagaggagatatcagatacatt 130 Query: 466 agtgtccataaaaccaatcatctcatcattaaaaaacctgttcgacaccgccatagagtt 525 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 agtgtccataaaaccaatcatctcatcattaaaaaacctgttcgacaccgccatagagtt 70 Query: 526 caacgaaatattcaaagatcatatgaacagtctagatgaagagatagaaaacaatttgtc 585 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 69 caacgaaatattcaaagatcatatgaacagtctagatgaagagatagaaaacaa-ttgtc 11 Query: 586 taaatgcatt 595 |||||||||| Sbjct: 10 taaatgcatt 1 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 8189 Number of Sequences: 1807 Number of extensions: 8189 Number of successful extensions: 59 Number of sequences better than 1.0e-20: 1 length of query: 966 length of database: 10,358,551 effective HSP length: 16 effective length of query: 950 effective length of database: 10,329,639 effective search space: 9813157050 effective search space used: 9813157050 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)