BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZD12RM1.SCF screened BAC_end
         (966 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig634                                                         1051   0.0  

>3x_Contig634 
          Length = 1748

 Score = 1051 bits (530), Expect = 0.0
 Identities = 546/550 (99%), Gaps = 1/550 (0%)
 Strand = Plus / Minus

                                                                       
Query: 46  cttctatactatggcagaggagctgaaaggatttcctcatgagagactatctatctcatt 105
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cttctatactatggcagaggagctgaaaggatttcctcatgagagactatctatctcatt 490

                                                                       
Query: 106 gaggagtaattcacagcaatatcaagatattcttttgttttttgatgattatcagtttga 165
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gaggagtaattcacagcaatatcaagatattcttttgttttttgatgattatcagtttga 430

                                                                       
Query: 166 tttggatagcaccaaccagcacttgtgtagtctggcagaattactgttaaagtctcatac 225
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttggatagcaccaaccagcacttgtgtagtctggcagaattactgttaaagtctcatac 370

                                                                       
Query: 226 actgttggcagagctgttttctgatgatgtgagcgtttctcaactcttaccgtattttga 285
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 actgttggcagagctgttttctgatgatgtgagcgtttctcaactcttaccgtattttga 310

                                                                       
Query: 286 ttggattcaagatggaagatctgaattttatcagctcttcaacgggataaagaccatcga 345
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttggattcaagagggaagatctgaattttatcagctcttcaacgggataaagaccatcga 250

                                                                       
Query: 346 aaaggtgttgctgcatctgatggaaatcatcgaagatgaatttgggtgtaatgaagatga 405
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 249 aaaggtgttgctgcatctgatggaaatcatcgaagaggaatttgggtgtaatgaagatga 190

                                                                       
Query: 406 actattccagaaagagttgactgcactttttgatttattagaggagatatcagatacatt 465
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 actattccagaaggagttgactgcactttttgatttattagaggagatatcagatacatt 130

                                                                       
Query: 466 agtgtccataaaaccaatcatctcatcattaaaaaacctgttcgacaccgccatagagtt 525
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 agtgtccataaaaccaatcatctcatcattaaaaaacctgttcgacaccgccatagagtt 70

                                                                       
Query: 526 caacgaaatattcaaagatcatatgaacagtctagatgaagagatagaaaacaatttgtc 585
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 69  caacgaaatattcaaagatcatatgaacagtctagatgaagagatagaaaacaa-ttgtc 11

                     
Query: 586 taaatgcatt 595
           ||||||||||
Sbjct: 10  taaatgcatt 1


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8189
Number of Sequences: 1807
Number of extensions: 8189
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 966
length of database: 10,358,551
effective HSP length: 16
effective length of query: 950
effective length of database: 10,329,639
effective search space: 9813157050
effective search space used: 9813157050
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 51 (101.6 bits)