BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZE06FM1.SCF screened BAC_end
         (926 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1617                                                        1467   0.0  

>3x_Contig1617 
          Length = 15119

 Score = 1467 bits (740), Expect = 0.0
 Identities = 815/836 (97%), Gaps = 3/836 (0%)
 Strand = Plus / Plus

                                                                       
Query: 89  gtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattgatt 148
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 34  gtctagatctgctagagtcacttggttttatgataggaatttccttagttttaattgatt 93

                                                                       
Query: 149 caaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatctg 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94  caaattttgatctgacctcttcaatctcttcttcagcttcttcttcttcgttagaatctg 153

                                                                       
Query: 209 agaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctttt 268
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 agaactcttctctttgggtcttgttctctaaattagatggtttcttttgtcccttctttt 213

                                                                       
Query: 269 cagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtcgc 328
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 cagcccaaagttgagctggtgacttttcattcttgaaacccttgatcaccttatcgtcgc 273

                                                                       
Query: 329 tatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgtatt 388
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tatcgtttcctgatgattgagctgaggaagaactctttggtcccaagactttgttgtatt 333

                                                                       
Query: 389 ctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatcaa 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 ctgcatccctctttagcttggattcttgctttaatttagcaatctcagattgaggatcaa 393

                                                                       
Query: 449 tctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttctt 508
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tctttttgtcgtaattaggccccgaaacaactagacggggatcttctttactgttttctt 453

                                                                       
Query: 509 cagcaatcactttttgtagatcaactttaccaattggtttccaggaagaagaatttggtt 568
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 cagcaatcactttttgtagatcaactttaccaattggtttccaggaagaagaatttggtt 513

                                                                       
Query: 569 ctagtggtttcttgtcgaaatcacgttcttccaactctggttcaccccattcatcgtcct 628
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ctagtggtttcttgtcgaaatcacgttcttccaactctggttcaccccattcatcgtcct 573

                                                                       
Query: 629 tcttacctctgctcttctcagtctttgggggagatacggatcttcttgatgggatcgatg 688
           |||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 574 tcttacctctgctcttctcagtctttgggggagaaacggatcttcttgatgggaacgatg 633

                                                                       
Query: 689 gtgtaagtttcctttgctcagattgtctggatgaaacactgactggtttcttggctgtct 748
           ||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 gtgtaggttccttttgctcagattgtctggatgaaacactgactggtttcttggctgtct 693

                                                                       
Query: 749 tggcagcaaaggaaattggctccttggaggccagttgtttgttggtgaattgaattacgg 808
           |||||||| |||||||||||| |||||||||| || |||||||| |||||||||| ||||
Sbjct: 694 tggcagcagaggaaattggcttcttggaggccggt-gtttgttgttgaattgaataacgg 752

                                                                       
Query: 809 gcaccagcggatttgctgattttcattaacattccagattcatctaagtcatcctcatct 868
           ||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 753 gcaccagcggagttgctgattttcattaacaattcagattcatctaagtcatcctcatct 812

                                                                   
Query: 869 ctggcggtaacctgaacatgttgaggtccttaaaccttggtttagagatcacaccg 924
           |||||||||||||||||||| | ||||| ||||||  | | |||||||||||||||
Sbjct: 813 ctggcggtaacctgaacatggt-aggtc-ttaaacacttgattagagatcacaccg 866


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8327
Number of Sequences: 1807
Number of extensions: 8327
Number of successful extensions: 154
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)