BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZE08RM1.SCF screened BAC_end (914 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig150 797 0.0 >3x_Contig150 Length = 1017 Score = 797 bits (402), Expect = 0.0 Identities = 557/602 (92%), Gaps = 5/602 (0%) Strand = Plus / Minus Query: 228 aaagaaagcatttcttcaaacgtcgatcccgtaccaatttttgaggccactaaatcactg 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1017 aaagaaagcatttcttcaaacgtcgatcccgtaccaatttttgaggccactaaatcactg 958 Query: 288 ctctcgattcccaaattttctccaatagcattgaaatctttgacaaacgattcataagcc 347 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 957 ctctcgagtcccaaattttctccaatagcattgaaatctttgacaaacgattcataagcc 898 Query: 348 tgtgcttctttttcagtaatgggaacagtatcatgtgttccgacaagagaaaaaagtcta 407 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 897 tgtgcttctttttcagtaatgggaacggtatcatgtgttccgacaagagaaaaaagtcta 838 Query: 408 ataaacgtattctgctctgtttcaaacaaatctctcatgtttttcaaatggagtaaaacg 467 ||||||||||||||||||||||||||||||| | | | |||||||||||||||||||||| Sbjct: 837 ataaacgtattctgctctgtttcaaacaaatgtgtgaggtttttcaaatggagtaaaacg 778 Query: 468 tataattgcaggtgcgtcagttcttgcgatgcttccggaatatcgagttgcaatgggatg 527 |||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||| Sbjct: 777 tataattgtaggtgcgtcagttcttccgatgtttccggaatatcgagttgcaatgggatg 718 Query: 528 atttcatataccttacgtaatacgacagaagtatttgacagaataatggattcaattaat 587 |||||| |||||||| |||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 717 atttcaaataccttaggtaatacgacagaagtatttgagagaataatgttttcaattaat 658 Query: 588 ttgttc-aaactccatgactgatcttgggtttatctctaatgagatcgat-atatggata 645 |||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct: 657 ttgttccaaacttcatgactgatcttgggtttatctctaatgagattgattatatggata 598 Query: 646 ctgcatgcaacatctgtgactgtcattacttttt-gtcatctctaatg-cgatcggttca 703 |||| ||||||||||||||||||||||||||||| | ||||||||||| |||| || ||| Sbjct: 597 ctgcgtgcaacatctgtgactgtcattacttttttgccatctctaatgtcgattggatca 538 Query: 704 aagttgaccaagcgatttaaa-ctgtttttcaaacctcttttggaagcttttcggtacct 762 ||||||||||||||||||||| ||||| | || | || | || ||||||| |||||| Sbjct: 537 aagttgaccaagcgatttaaaactgttatcaaagcatcatctgaaagctttacggtacta 478 Query: 763 aagtttttttaaaaatactcccatggacttttaactttttctggggtatttttaagcact 822 ||||| | || |||||||||||||| |||||||||| || ||||| |||||| ||| ||| Sbjct: 477 aagttctcttcaaaatactcccatgaacttttaactcttcctgggttattttcaagtact 418 Query: 823 tg 824 || Sbjct: 417 tg 416 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7672 Number of Sequences: 1807 Number of extensions: 7672 Number of successful extensions: 40 Number of sequences better than 1.0e-20: 1 length of query: 914 length of database: 10,358,551 effective HSP length: 16 effective length of query: 898 effective length of database: 10,329,639 effective search space: 9276015822 effective search space used: 9276015822 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)