BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZF05FM1.SCF screened BAC_end (899 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1719 1235 0.0 >3x_Contig1719 Length = 15804 Score = 1235 bits (623), Expect = 0.0 Identities = 748/775 (96%), Gaps = 11/775 (1%) Strand = Plus / Plus Query: 86 ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14920 ccttacaaacattcacacaccattgtcattacttgatccaatttgatgacaagtgacaca 14979 Query: 146 aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 14980 aactttctcccgttatacagcacttcctgttaccttcactactgtagattctagtggtct 15039 Query: 206 ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15040 ttctttttcaacagtgttttttccccttcctcaatttcgcttcaagaggaaaaaaagccc 15099 Query: 266 gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15100 gtcagttgagttggctgtttcaattgcaagtacagaaaacggtttgtactcagctagctt 15159 Query: 326 tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15160 tcagtgtgtatattgttggaagtttgtagcttggatctaaagcgtcactgccgggatgat 15219 Query: 386 tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15220 tgtccagttttctcttattccagttaatttcatttttgtgtttgaacttgatatataaaa 15279 Query: 446 gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15280 gacggacacaaaccgtcaaattgacagtttcgtggtgtctagttgtcgtagcttttctac 15339 Query: 506 tactgttaatttggattgataaataattcagtaggaaatagccccactaaaaaattcaag 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 15340 tactgttaatttggattgataaataattcagtaggaaatagccccactaaaaaattcaag 15399 Query: 566 actctctcggtacttgaggagagaaa-tacatcatacaagatttcattttccaa-ttgat 623 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 15400 actctctcggtacttgaggagagaaattacatcatacaagatttcattttccaagttgat 15459 Query: 624 taattttattaagacaatgtcaatcaactcatcacaagattttagagaaagggtgtcacg 683 |||||||||| |||||||||||||||||||||||| || ||||||| |||||||||||| Sbjct: 15460 aaattttattaggacaatgtcaatcaactcatcacagga-tttagag-aagggtgtcacg 15517 Query: 684 gacacccaaaatattgaagattctcatcaaacgtaccagcaccatattcaacatgttttc 743 ||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||| | Sbjct: 15518 gacacccaaaatattgaggattctcatcaaccgtaccagcaccatattcacaatgtttcc 15577 Query: 744 atcgatgggggatacctgccgtttggggtaattaaacttattagaaatcggagttgctaa 803 |||||||||| ||| || ||||| ||||||| |||||||| ||| |||||||||||||| Sbjct: 15578 atcgatggggattacgtg-cgttt-gggtaatcaaacttataagagatcggagttgctaa 15635 Query: 804 acgcctttccccggtggactttaaaccctgttatccattccacgttcctcctcca 858 ||| ||||| ||||| |||||| ||||||| |||||| |||||| |||||||||| Sbjct: 15636 acg-ctttcgccggt-gacttt-aaccctggtatcca-tccacg-tcctcctcca 15685 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7121 Number of Sequences: 1807 Number of extensions: 7121 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 899 length of database: 10,358,551 effective HSP length: 16 effective length of query: 883 effective length of database: 10,329,639 effective search space: 9121071237 effective search space used: 9121071237 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)