BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZF06RM1.SCF screened BAC_end (940 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1540 1398 0.0 >3x_Contig1540 Length = 9505 Score = 1398 bits (705), Expect = 0.0 Identities = 779/799 (97%), Gaps = 6/799 (0%) Strand = Plus / Minus Query: 43 cttttacaaaggcgttccaagagcgtagagcagcagttgatgatgagacattagataaat 102 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5947 cttttacaaaggcgttccaagagcgtagagcagcagttgatgatgagacattagataaat 5888 Query: 103 tcatgaaaccacacaaactagtttggggccaacaagaaagactggtcccagtcaaaccaa 162 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5887 tcatgaaaccacacaaactagtttggggccaacaagaaagactggtcccagtcaaaccaa 5828 Query: 163 aggaagataagaagaagaacactgaagcctgaaagattgatcacttagcatgagtaccga 222 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5827 aggaagataagaagaagaacactgaagcctgaaagattgatcacttagcatgagtaccga 5768 Query: 223 acgcttgccttgaaatttaacccattaaaggttgccatatttgttagtgcagatataaat 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5767 acgcttgccttgaaatttaacccattaaaggttgccatatttgttagtgcagatataaat 5708 Query: 283 attgactcttagctgaaggtatgcgtaaagagaaggaaagaagcaaaggcatttctatat 342 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5707 attgactcttagctgaaggtatgcgtaaagagaaggaaagaagcaaaggcatttctatat 5648 Query: 343 acagagtaataagtatcttttatctctagtatttaattcgtttttgtatcatttgttaaa 402 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5647 acagagtaataagtatcttttatctctagtatttaattcgtttttgtatcatttgttaaa 5588 Query: 403 gtcattatagattataattcagagccggccagatgtttgatagtataatcgaagataaag 462 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5587 gtcattatagattataattcagagccggccagatgtttgatagtataatcgaagataaag 5528 Query: 463 gtcgaacagtaaaaccaacaggccgagattattatgttactggaacagaaattattgtat 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5527 gtcgaacagtaaaaccaacaggccgagattattatgttactggaacagaaattattgtat 5468 Query: 523 tcattgatgnctttgaatgtaatccaccanagcttcaagtggtataattgaaatatcgaa 582 ||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 5467 tcattgatgcttttgaatgtaatccaccaaagcttcaagtgtaataattgaaatatcgaa 5408 Query: 583 ttctttgccaaattcgacacagtcatccaatctcatcatatctncatcttcatctttgac 642 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 5407 ttctttgccaaattcgacacagtcatccaatctcatcatatctccatcttcatctttgac 5348 Query: 643 gagttcaccaatgacaccgactggtgggagtgatgcaagcttgcattagtcgacagctgc 702 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5347 gagttcaccaatgacaccgactggtgggagtgatgcaagcttgcataggtcgacagctgc 5288 Query: 703 ttcagtgtgaccacgtctggccagaacaccgncttctttggctctt-atgtcaacacatg 761 ||||||||||||||||||||||||||||||| |||||||||||||| ||| || |||||| Sbjct: 5287 ttcagtgtgaccacgtctggccagaacaccgccttctttggctcttaatggcaccacatg 5228 Query: 762 accagncttc-agtattcaata--cgtagtagtcttgtcagcaag-ttggaacacg-taa 816 ||||| |||| |||| |||||| |||||||||||||||||||| |||||||||| ||| Sbjct: 5227 accaggcttcaagtaatcaatagcggtagtagtcttgtcagcaagtttggaacacgttaa 5168 Query: 817 tgcacgatcatgtgctgaa 835 ||||||||||||||||||| Sbjct: 5167 tgcacgatcatgtgctgaa 5149 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7033 Number of Sequences: 1807 Number of extensions: 7033 Number of successful extensions: 48 Number of sequences better than 1.0e-20: 1 length of query: 940 length of database: 10,358,551 effective HSP length: 16 effective length of query: 924 effective length of database: 10,329,639 effective search space: 9544586436 effective search space used: 9544586436 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)