BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZF09RM1.SCF screened BAC_end (958 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig440 1388 0.0 >3x_Contig440 Length = 1389 Score = 1388 bits (700), Expect = 0.0 Identities = 759/774 (98%), Gaps = 5/774 (0%) Strand = Plus / Minus Query: 48 tggataacattctgtggagtc-catcgacgtcaagatcgaaaggatcaaaaagaatagta 106 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 787 tggataacattctgtggagtcacatcgacgtcaagatcgaaaggatcaaaaagaatagta 728 Query: 107 ttatcaacggaatatacaagtaaaccttctgttgaaccggcggcaaatgcattagcagta 166 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 ttatcaacggaatatacaagtaaaccttctgttgaaccggcggcaaatgcattagcagta 668 Query: 167 ggagagaatcttatagacgtcactctgatcgccggtctgactcttcttgtcgataagtca 226 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 667 ggagagaatcttatagacgtcactctgatcgccggtctgactcttcttgtcgataagtca 608 Query: 227 cctcctctattcgaaccaggaaggctgttatctacgcgatcttccaagtctgaattttct 286 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 607 cctcctctattcgaaccaggaaggctgttatctacgcgatcttccaagtctgaattttct 548 Query: 287 gcatcttgatcaatgagatccaaagatcctgcttctgtcattctacttgagtttaaaaac 346 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 547 gcatcttgatcaatgagatccaaagatcctgcttctgtcattctacttgagtttaaaaac 488 Query: 347 tccatggtgccgtttaacatcatgtttttggatacggtaaatcttcttagcagtacttcg 406 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 487 tccatggtgccgtttaacatcatgtttttggatacggtaaatcttcttagcagtacttcg 428 Query: 407 tttggaatgtcataaagacatatggaattattgttaccggctgcaaccaaagagagacca 466 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 427 tttggaatgtcataaagacatatggaattattgttaccggctgcaaccaaagagagacca 368 Query: 467 tcgaaactgtaatgaatggtggtaaaatatttagatcttgctgaactttctgatgtgaac 526 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 367 tcgaaactgtaatgaatggtggtaaaatatttagatcttgctgaactttctgatgtgaac 308 Query: 527 cgatcttccaaatgtctacccgagattatatcccttttgccgtcaatatttcccacctgt 586 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 307 cgatcttccaaatgtctacccgagattatatcccttttgccgtcaatatttcccacctgt 248 Query: 587 ttgccctcagcaacatcaaagaaatatatttgccccgctagagtacttgcagctatttgt 646 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 247 ttgccctcagcaacatcaaagaataatatttgccccgctagagtacttgcagctatttgt 188 Query: 647 tgaccattccgggtttcatag-aatagattanacatcagaatatacttcaaaaggctcta 705 ||||||| | |||||||||| ||||||| | ||||||||| |||||||||||||||||| Sbjct: 187 tgaccat--ccggtttcatagaaatagataaaacatcagaaaatacttcaaaaggctcta 130 Query: 706 cctgttgacttctaccgaagagagaccacactcttattggtttattccatgaagcggatg 765 |||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||| Sbjct: 129 cctgttgacttctaccgaagagagaccacactctaattgttttatcccatgaagcggatg 70 Query: 766 ccaaaactccattctcattactgaaagataaaccaggagataagaccttcatgg 819 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||| Sbjct: 69 ccaaaactccattctcattactgaaagataaa-caggagataggaccttcatgg 17 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6001 Number of Sequences: 1807 Number of extensions: 6001 Number of successful extensions: 38 Number of sequences better than 1.0e-20: 1 length of query: 958 length of database: 10,358,551 effective HSP length: 16 effective length of query: 942 effective length of database: 10,329,639 effective search space: 9730519938 effective search space used: 9730519938 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)