BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZG02FM1.SCF screened BAC_end
         (899 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1776                                                        1584   0.0  

>3x_Contig1776 
          Length = 26138

 Score = 1584 bits (799), Expect = 0.0
 Identities = 811/815 (99%)
 Strand = Plus / Plus

                                                                         
Query: 85    tttgattgcataggcaatttcttcgttggtactttggtctatacgtttcaactctgaagt 144
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23033 tttgattgcataggcaatttcttcgttggtactttggtctatacgtttcaactctgaagt 23092

                                                                         
Query: 145   ctccgaggaaccagtataacttgtcccggctaatttttcactcaagaaagcgtctgtctc 204
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23093 ctccgaggaaccagtataacttgtcccggctaatttttcactcaagaaagcgtctgtctc 23152

                                                                         
Query: 205   atcctcttcttcatgatcagcaccatttgattccttgaatccaagcgtggtttgcctctt 264
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23153 atcctcttcttcaggatcagcaccatttgattccttgaatccaagcgtggtttgcctctt 23212

                                                                         
Query: 265   cttcttagatcctatgccattatatttcaacacatactcgtttaggaactctgaaccacc 324
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23213 cttcttagatcctatgccattatatttcaacacatactcgtttaggaactctgaaccacc 23272

                                                                         
Query: 325   cgccattctggcatcaatctggtccaatgtgttagcacggaagatcttctctttgcattg 384
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23273 cgccattctggcatcaatctggtccaatgtgttagcacggaagatcttctctttgcattg 23332

                                                                         
Query: 385   gtgtaattccgtattcaccaattgccccgaatgtgcatttttcaaatcactatccaattc 444
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23333 gtgtaattccgtattcaccaattgccccgaatgtgcatttttcaaatcactatccaattc 23392

                                                                         
Query: 445   gatgcccaacttgcctgcttgtaagattagcgttctcatcgactcaattgcatctgccca 504
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23393 gatgcccaacttgcctgcttgtaagattagcgttctcatcgactcaattgcatctgccca 23452

                                                                         
Query: 505   gatgacttgtccatattgcattcgttctctatgggtaaatccgccttggtgtaggagttt 564
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23453 gatgacttgtccatattgcattcgttctctatgggtaaatccgccttggtgtaggagttt 23512

                                                                         
Query: 565   catttgtttcaacactgttgatttaccgctttctcctgctcctaatagaaggagcttcac 624
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23513 catttgtttcaacactgttgatttaccgctttctcctgctcctaatagaaggagcttcac 23572

                                                                         
Query: 625   ctcattcttattcttattcctttcctgctgtaaattttgctcaatgagatcatttgccct 684
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23573 ctcattcttattcttattcctttcctgctgtaaattttgctcaatgagatcatttgccct 23632

                                                                         
Query: 685   tttattttgaatgaagggatcatcctcgttctcatagtttcctgtacttgcgacgcaacc 744
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23633 tttattttgaatgaagggatcatcctcgttctcatagtttcctgtacttgcgacgcaacc 23692

                                                                         
Query: 745   cataatgcttaatttcttgccggccagcgtcagtttctttcatttgtttcattttccttt 804
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23693 cataatgcttaatttcttgccggccagcgtcagtttctttcatttgtttcattttccttt 23752

                                                                         
Query: 805   atagttcacgttttccccgtagttggcacgatgtggccaatccgtctatatatatgttaa 864
             ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23753 atagttcacgttttcgccgtagttggcacgatgtggccaatccgtctatatatatgttaa 23812

                                                
Query: 865   tataaaaaagtaacgtagcaatatttactttacat 899
             ||| |||| ||||||||||||||||||||||||||
Sbjct: 23813 tattaaaaggtaacgtagcaatatttactttacat 23847


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7170
Number of Sequences: 1807
Number of extensions: 7170
Number of successful extensions: 60
Number of sequences better than 1.0e-20: 1
length of query: 899
length of database: 10,358,551
effective HSP length: 16
effective length of query: 883
effective length of database: 10,329,639
effective search space: 9121071237
effective search space used: 9121071237
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)