BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZG02RM1.SCF screened BAC_end
         (923 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1434                                                        1346   0.0  

>3x_Contig1434 
          Length = 8845

 Score = 1346 bits (679), Expect = 0.0
 Identities = 720/729 (98%), Gaps = 4/729 (0%)
 Strand = Plus / Minus

                                                                        
Query: 41   catgatctcttttaagagaaaccatttcttctcaagttgaacagcttctgtataatcctt 100
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5231 catgatctcttttaagagaaaccatttcttctcaagttgaacagcttctgtataatcctt 5172

                                                                        
Query: 101  cttaagtttatcatttagttctgtgagccatttcttctcttccagcagtgtggactcatc 160
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5171 cttaagtttatcatttagttctgtgagccatttcttctcttccagcagtgtggactcatc 5112

                                                                        
Query: 161  taactgtgcatagtccacgttttccaaagctgggtcttctcttttccatatatcgatata 220
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5111 taactgtgcatagtccacgttttccaaagctgggtcttctcttttccatatatcgatata 5052

                                                                        
Query: 221  gtcttcgtgcatcttattgagtgaatccttatattggatcaacttaagcctgtttaaatc 280
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5051 gtcttcgtgcatcttattgagtgaatccttatattggatcaacttaagcctgtttaaatc 4992

                                                                        
Query: 281  ttcaatttcttctcgctgagctagctgacctggaatatgacgaatcacctcatagtttat 340
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4991 ttcaatttcttctcgctgagctagctgacctggaatatgacgaatcacctcatagtttat 4932

                                                                        
Query: 341  ctttaacgagtcatcaatggctactatatgtcttttgttcccagatttgcgatcctcgtc 400
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4931 ctttaacgagtcatcaatggctactatatgtcttttgttcccagatttgcgatcctcgtc 4872

                                                                        
Query: 401  agcagatgtgtgtagaggagcgttcttataacgagcaatggctcgtttacttctttgtac 460
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4871 agcagatgtgtgtagaggagcgttcttataacgagcaatggctcgtttacttctttgtac 4812

                                                                        
Query: 461  ttgtatattcttaaggtcttccatggatctctttttgttaattatctgttctgctgtcag 520
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4811 ttgtatattcttaaggtcttccatggatctctttttgttaattatctgttctgctgtcag 4752

                                                                        
Query: 521  agccgttacagtcatcctcggtggcttatttgtgtttgtgtgtgtgtggagttttcttta 580
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4751 agccgttacagtcatcctcggtggcttatttgtgtttgtgtgtgtgtggagttttcttta 4692

                                                                        
Query: 581  ctgctcttttttgttgntgattttggaagtatgtaaagatgcatatgactttctagtttg 640
            |||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 4691 ctgctcttttttgttgttgattttggaagtatgtaaagatgcatatgacttcttagtttg 4632

                                                                        
Query: 641  agactatattgtagagaccaagaagacgctaaaagataaatattgttntagtttgaaagg 700
            |||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 4631 agactatattgtagagacaaagaagacgctaaaagataaatattgttttag-ttgaaagg 4573

                                                                        
Query: 701  ggagctgttggagagtacaatttattttgatctttctgaaccgatgttaaagaattaagt 760
            ||||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 4572 ggagctg-tggagagtacaattta-tttgatctttctgaaccgatgttaaagaa-taagt 4516

                     
Query: 761  attagatgg 769
            |||||||||
Sbjct: 4515 attagatgg 4507


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,953
Number of Sequences: 1807
Number of extensions: 14953
Number of successful extensions: 222
Number of sequences better than 1.0e-20: 1
length of query: 923
length of database: 10,358,551
effective HSP length: 16
effective length of query: 907
effective length of database: 10,329,639
effective search space: 9368982573
effective search space used: 9368982573
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)