BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZG03RM1.SCF screened BAC_end
         (934 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1753                                                        1374   0.0  

>3x_Contig1753 
          Length = 23959

 Score = 1374 bits (693), Expect = 0.0
 Identities = 747/761 (98%), Gaps = 3/761 (0%)
 Strand = Plus / Minus

                                                                         
Query: 52    cttcaatttttgggttcatctatatgaatcgattcatcgtttattttaattgtattcttt 111
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19642 cttcaatttttgggttcatctatatgaatcgattcatcgtttattttaattgtattcttt 19583

                                                                         
Query: 112   ttataagagtgtcaagtaaaaaaaagtgaaggagattagaaacacttcaagtgaacgatg 171
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19582 ttataagagtgtcaagtaaaaaaaagtgaaggagattagaaacacttcaagtgaacgatg 19523

                                                                         
Query: 172   gatggaccagattcgtcgtattcttgctttgagatccacatttgttggaaagtggtcaaa 231
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19522 gatggaccagattcgtcgtattcttgctttgagatccacatttgttggaaagtggtcaaa 19463

                                                                         
Query: 232   gaggccaaaatagaaccaccgatccagacagagtactttctttctggaggagcgatgatc 291
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19462 gaggccaaaatagaaccaccgatccagacagagtactttctttctggaggagcgatgatc 19403

                                                                         
Query: 292   ttgaccttcatagaagaaggagccaaggcggtaatttccttttgcattctttcagcaata 351
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19402 ttgaccttcatagaagaaggagccaaggcggtaatttccttttgcattctttcagcaata 19343

                                                                         
Query: 352   cctgggaacatggtggtaccaccggacatgacgatgttaccgtacaattcctttctgaca 411
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19342 cctgggaacatggtggtaccaccggacatgacgatgttaccgtacaattcctttctgaca 19283

                                                                         
Query: 412   tcaacatcacacttcatgatggagttgtaagtagtttggtcgataccagcagcttccaaa 471
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19282 tcaacatcacacttcatgatggagttgtaagtagtttggtcgataccagcagcttccaaa 19223

                                                                         
Query: 472   cttagaacagatggatggaacaaagcttctggagctctgaatctttcgttaccgatagtg 531
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19222 cttagaacagatggatggaacaaagcttctggagctctgaatctttcgttaccgatagtg 19163

                                                                         
Query: 532   ataacttggccatctggtaattcgtaagacttttcaacagcggatgattgagatgcagtt 591
             ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 19162 ataacttggccatctggtaattcgtaagacttttcaacagcggatgattgagaagcagtt 19103

                                                                         
Query: 592   tgcatttcttgttcgaagtccatagcgacgtaacatagcttttccttgatgtcacggacg 651
             |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 19102 tgcatttcttgttcgaagtccaaagcgacgtaacatagcttttccttgatgtcacggacg 19043

                                                                         
Query: 652   atttctctttcagcggtagtagagatagaagtaccacgttcagccaagatcttcatcaag 711
             ||||||||||||||||||||||||| |||   ||||||||||||||||||||||||||||
Sbjct: 19042 atttctctttcagcggtagtagagaaagagtaaccacgttcagccaagatcttcatcaag 18983

                                                                         
Query: 712   tagtcggtgatatctcta-cagccaagtcgattctcagaatagcgtgaggcaaggagata 770
             |||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |
Sbjct: 18982 tagtcggtgatatctctaccagccaagtcgattctcaagatagcgtgaggcaaggagaaa 18923

                                                      
Query: 771   -cggcgtaga-tggaacaacgtggggtacaccgtcaccaga 809
              ||||||||| ||||||||||||||  ||||||||||||||
Sbjct: 18922 ccggcgtagattggaacaacgtgggtaacaccgtcaccaga 18882


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6907
Number of Sequences: 1807
Number of extensions: 6907
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 1
length of query: 934
length of database: 10,358,551
effective HSP length: 16
effective length of query: 918
effective length of database: 10,329,639
effective search space: 9482608602
effective search space used: 9482608602
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)