BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZG03RM1.SCF screened BAC_end (934 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1753 1374 0.0 >3x_Contig1753 Length = 23959 Score = 1374 bits (693), Expect = 0.0 Identities = 747/761 (98%), Gaps = 3/761 (0%) Strand = Plus / Minus Query: 52 cttcaatttttgggttcatctatatgaatcgattcatcgtttattttaattgtattcttt 111 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19642 cttcaatttttgggttcatctatatgaatcgattcatcgtttattttaattgtattcttt 19583 Query: 112 ttataagagtgtcaagtaaaaaaaagtgaaggagattagaaacacttcaagtgaacgatg 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19582 ttataagagtgtcaagtaaaaaaaagtgaaggagattagaaacacttcaagtgaacgatg 19523 Query: 172 gatggaccagattcgtcgtattcttgctttgagatccacatttgttggaaagtggtcaaa 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19522 gatggaccagattcgtcgtattcttgctttgagatccacatttgttggaaagtggtcaaa 19463 Query: 232 gaggccaaaatagaaccaccgatccagacagagtactttctttctggaggagcgatgatc 291 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19462 gaggccaaaatagaaccaccgatccagacagagtactttctttctggaggagcgatgatc 19403 Query: 292 ttgaccttcatagaagaaggagccaaggcggtaatttccttttgcattctttcagcaata 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19402 ttgaccttcatagaagaaggagccaaggcggtaatttccttttgcattctttcagcaata 19343 Query: 352 cctgggaacatggtggtaccaccggacatgacgatgttaccgtacaattcctttctgaca 411 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19342 cctgggaacatggtggtaccaccggacatgacgatgttaccgtacaattcctttctgaca 19283 Query: 412 tcaacatcacacttcatgatggagttgtaagtagtttggtcgataccagcagcttccaaa 471 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19282 tcaacatcacacttcatgatggagttgtaagtagtttggtcgataccagcagcttccaaa 19223 Query: 472 cttagaacagatggatggaacaaagcttctggagctctgaatctttcgttaccgatagtg 531 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 19222 cttagaacagatggatggaacaaagcttctggagctctgaatctttcgttaccgatagtg 19163 Query: 532 ataacttggccatctggtaattcgtaagacttttcaacagcggatgattgagatgcagtt 591 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 19162 ataacttggccatctggtaattcgtaagacttttcaacagcggatgattgagaagcagtt 19103 Query: 592 tgcatttcttgttcgaagtccatagcgacgtaacatagcttttccttgatgtcacggacg 651 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 19102 tgcatttcttgttcgaagtccaaagcgacgtaacatagcttttccttgatgtcacggacg 19043 Query: 652 atttctctttcagcggtagtagagatagaagtaccacgttcagccaagatcttcatcaag 711 ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| Sbjct: 19042 atttctctttcagcggtagtagagaaagagtaaccacgttcagccaagatcttcatcaag 18983 Query: 712 tagtcggtgatatctcta-cagccaagtcgattctcagaatagcgtgaggcaaggagata 770 |||||||||||||||||| |||||||||||||||||| ||||||||||||||||||| | Sbjct: 18982 tagtcggtgatatctctaccagccaagtcgattctcaagatagcgtgaggcaaggagaaa 18923 Query: 771 -cggcgtaga-tggaacaacgtggggtacaccgtcaccaga 809 ||||||||| |||||||||||||| |||||||||||||| Sbjct: 18922 ccggcgtagattggaacaacgtgggtaacaccgtcaccaga 18882 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6907 Number of Sequences: 1807 Number of extensions: 6907 Number of successful extensions: 46 Number of sequences better than 1.0e-20: 1 length of query: 934 length of database: 10,358,551 effective HSP length: 16 effective length of query: 918 effective length of database: 10,329,639 effective search space: 9482608602 effective search space used: 9482608602 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)