BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZG05FM1.SCF screened BAC_end (909 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1664 1554 0.0 >3x_Contig1664 Length = 15696 Score = 1554 bits (784), Expect = 0.0 Identities = 815/823 (99%), Gaps = 2/823 (0%) Strand = Plus / Minus Query: 87 gcaaaatttacaatcaagaataagggcgagtagcaagaacccgatgatatataggagtaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13794 gcaaaatttacaatcaagaataagggcgagtagcaagaacccgatgatatataggagtaa 13735 Query: 147 gcttctaaggtataggaaaacctatttgcagaatttcatcagacaaagggtctgaggaag 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13734 gcttctaaggtataggaaaacctatttgcagaatttcatcagacaaagggtctgaggaag 13675 Query: 207 gaatctgtaactgatccttccacaacagtactgtttacaatacgcagctattcatgtgtg 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13674 gaatctgtaactgatccttccacaacagtactgtttacaatacgcagctattcatgtgtg 13615 Query: 267 aaccggttgtgggtgtttagaaaaaaaaaaaaagaacactacatacatcgctgcctgttc 326 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 13614 aaccggttgtgggtgtttagaaaaaagaaaaaagaacactacatacatcgctgcctgttc 13555 Query: 327 ttcttgttctgcgttacttataataataataggtcattctctacaaagttccttcgtgtc 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13554 ttcttgttctgcgttacttataataataataggtcattctctacaaagttccttcgtgtc 13495 Query: 387 tgtgcaataaatcacatcaacatataaatactatagtcattacttaaccgtaaaggtgcg 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13494 tgtgcaataaatcacatcaacatataaatactatagtcattacttaaccgtaaaggtgcg 13435 Query: 447 gaaaatatgtatgatgaagtaatgagtaagatgagatgcatttccgaaacgaaggaatgg 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13434 gaaaatatgtatgatgaagtaatgagtaagatgagatgcatttccgaaacgaaggaatgg 13375 Query: 507 acacggcaatttcgtgctgggatggaacaggttttcatgattccaatcatttcttgtcgc 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13374 acacggcaatttcgtgctgggatggaacaggttttcatgattccaatcatttcttgtcgc 13315 Query: 567 acccttttactcgcaattcttgactcttgtaaatcttgagcagtctcacaacagcggaat 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13314 acccttttactcgcaattcttgactcttgtaaatcttgagcagtctcacaacagcggaat 13255 Query: 627 aacgttgctctggcgggaataaatggataaaaaggatttaagctgccggacagtgaaccc 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13254 aacgttgctctggcgggaataaatggataaaaaggatttaagctgccggacagtgaaccc 13195 Query: 687 aatcgtcaaaccaagaaaagataggaaaaatcgctttacttacgagatgctacagctatc 746 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 13194 aatcgtcaaaccaagaaaagaaaggaaaaatcgctttacttacgagatgctacagctatc 13135 Query: 747 cattcctcatctcattagaaaagagcacgcagtttatcaatcgaatgtatattcgttcta 806 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13134 catccctcatctcattagaaaagagcacgcagtttatcaatcgaatgtatattcgttcta 13075 Query: 807 atcggattgaaggtgtttcttgttgtatagcgcaacattatgtcgtgcacattcaaaatt 866 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 13074 atcggattgaaggtg-ttcttgttgtatagcgcaacattatgtcgtgcacattcaaaatt 13016 Query: 867 cctgcagg-attttgaatgtgcgatanacattcccaaaaagag 908 |||||||| ||||||||||||||||| |||| | ||||||||| Sbjct: 13015 cctgcaggaattttgaatgtgcgatagacatccacaaaaagag 12973 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,508 Number of Sequences: 1807 Number of extensions: 13508 Number of successful extensions: 219 Number of sequences better than 1.0e-20: 1 length of query: 909 length of database: 10,358,551 effective HSP length: 16 effective length of query: 893 effective length of database: 10,329,639 effective search space: 9224367627 effective search space used: 9224367627 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)