BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZH06FM1.SCF screened BAC_end
         (926 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1207                                                        1300   0.0  

>3x_Contig1207 
          Length = 6451

 Score = 1300 bits (656), Expect = 0.0
 Identities = 799/840 (95%), Gaps = 5/840 (0%)
 Strand = Plus / Plus

                                                                       
Query: 88  gggtgagccgcagatcgactttaaccagtgagagataacttgaactcacgcttcacatat 147
           ||||| |||||  |||| ||||||  |||||| ||| |||||  | ||||||||| ||||
Sbjct: 162 gggtgcgccgccaatcgcctttaaaaagtgagcgatcacttgcccacacgcttcaaatat 221

                                                                       
Query: 148 ttctatattattttcagttttagtagaccaacattggcgttgaaattagtatttattata 207
           |||| |||| ||||||||||| || |||||||| ||||||||| |||||| |||||||||
Sbjct: 222 ttctctattcttttcagttttcgtcgaccaacaatggcgttgacattagtctttattata 281

                                                                       
Query: 208 ttattttacaagatagcccgttcttcaactggatagtggaagcaaaggagacattagatg 267
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ttattttacaagatagcccgttcttcaactggatagtggaagcaaaggagacattagatg 341

                                                                       
Query: 268 tattagtattattcttattgattgcgttggtactatttgtctataggaaatttatcggaa 327
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tattagtattattcttattgattgcgttggtactatttgtctataggaaatttatcggaa 401

                                                                       
Query: 328 ttctcataacttttttctatagctttgaggtactcgttatgtttatggtactgcctgttc 387
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttctcataacttttttctatagctttgaggtactcgttatgtttatggtactgcctgttc 461

                                                                       
Query: 388 aaatataggtatttagcgttccaattgtccattattagatcaaaattcggattatgcgtc 447
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aaatataggtatttagcgttccaattgtccattattagatcaaaattcggattatgcgtc 521

                                                                       
Query: 448 caaatcttgattaacgctggttttatatcattgtgttcgtttatccattctgccaatttt 507
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 caaatcttgattaacgctggttttatatcattgtgttcgtttatccattctgccaatttt 581

                                                                       
Query: 508 gtaacaaaaattttccaatgtagcagctgtgaatccatgtttaatttacctgattcttcg 567
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gtaacaaaaattttccaatgtagcagctgtgaatccatgtttaatttacctgattcttcg 641

                                                                       
Query: 568 acgttgaagttggtgtacaaggaatccaatccatacaagggttcccagtggaaaacttta 627
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 acgttgaagttggtgtacaaggaatccaatccatacaagggttcccagtggaaaacttta 701

                                                                       
Query: 628 atttttgggttcactttgaagctgttatggtcttcttggtactcagacagtattcttcca 687
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 702 atttttgggttcactttgaagctgttagggtcttcttggtactcagacagtattcttcca 761

                                                                       
Query: 688 gaccatccatattcttgattagatatccatttc-aattgcgaatccggaatgggtgttat 746
           ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||
Sbjct: 762 gaccatccatattcttgattagata-ccatttcaaattgcgaatccggaatgggtgtaat 820

                                                                       
Query: 747 tctactgtcccataaatttatgcaatccacggaagtttcacattgcttgggaagatgaac 806
            |||||| |||| |||||||||||||||||| | |||||||||||||| |||||||||||
Sbjct: 821 cctactggcccagaaatttatgcaatccacgaaggtttcacattgctt-ggaagatgaac 879

                                                                       
Query: 807 attcaaatatcagacttctgtgatgctgatcatcggcatattcaacttggaatcattccg 866
           ||||||||||||||||  |||||||||||||||||||| ||||||||||||| |||| ||
Sbjct: 880 attcaaatatcagactcttgtgatgctgatcatcggcaaattcaacttggaaacatttcg 939

                                                                       
Query: 867 ggtttgatgcacccgtatgtatc-atggatgttttttcaatgagctccgcaaatgcacca 925
           | ||||||||||||||||| ||| |||  ||||| | |||||||||||||||||||||||
Sbjct: 940 gttttgatgcacccgtatg-atcaatgattgtttctccaatgagctccgcaaatgcacca 998


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6970
Number of Sequences: 1807
Number of extensions: 6970
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 926
length of database: 10,358,551
effective HSP length: 16
effective length of query: 910
effective length of database: 10,329,639
effective search space: 9399971490
effective search space used: 9399971490
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)