BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZH06FM1.SCF screened BAC_end (926 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1207 1300 0.0 >3x_Contig1207 Length = 6451 Score = 1300 bits (656), Expect = 0.0 Identities = 799/840 (95%), Gaps = 5/840 (0%) Strand = Plus / Plus Query: 88 gggtgagccgcagatcgactttaaccagtgagagataacttgaactcacgcttcacatat 147 ||||| ||||| |||| |||||| |||||| ||| ||||| | ||||||||| |||| Sbjct: 162 gggtgcgccgccaatcgcctttaaaaagtgagcgatcacttgcccacacgcttcaaatat 221 Query: 148 ttctatattattttcagttttagtagaccaacattggcgttgaaattagtatttattata 207 |||| |||| ||||||||||| || |||||||| ||||||||| |||||| ||||||||| Sbjct: 222 ttctctattcttttcagttttcgtcgaccaacaatggcgttgacattagtctttattata 281 Query: 208 ttattttacaagatagcccgttcttcaactggatagtggaagcaaaggagacattagatg 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 ttattttacaagatagcccgttcttcaactggatagtggaagcaaaggagacattagatg 341 Query: 268 tattagtattattcttattgattgcgttggtactatttgtctataggaaatttatcggaa 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 342 tattagtattattcttattgattgcgttggtactatttgtctataggaaatttatcggaa 401 Query: 328 ttctcataacttttttctatagctttgaggtactcgttatgtttatggtactgcctgttc 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 402 ttctcataacttttttctatagctttgaggtactcgttatgtttatggtactgcctgttc 461 Query: 388 aaatataggtatttagcgttccaattgtccattattagatcaaaattcggattatgcgtc 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 462 aaatataggtatttagcgttccaattgtccattattagatcaaaattcggattatgcgtc 521 Query: 448 caaatcttgattaacgctggttttatatcattgtgttcgtttatccattctgccaatttt 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 522 caaatcttgattaacgctggttttatatcattgtgttcgtttatccattctgccaatttt 581 Query: 508 gtaacaaaaattttccaatgtagcagctgtgaatccatgtttaatttacctgattcttcg 567 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 582 gtaacaaaaattttccaatgtagcagctgtgaatccatgtttaatttacctgattcttcg 641 Query: 568 acgttgaagttggtgtacaaggaatccaatccatacaagggttcccagtggaaaacttta 627 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 642 acgttgaagttggtgtacaaggaatccaatccatacaagggttcccagtggaaaacttta 701 Query: 628 atttttgggttcactttgaagctgttatggtcttcttggtactcagacagtattcttcca 687 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 702 atttttgggttcactttgaagctgttagggtcttcttggtactcagacagtattcttcca 761 Query: 688 gaccatccatattcttgattagatatccatttc-aattgcgaatccggaatgggtgttat 746 ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||| || Sbjct: 762 gaccatccatattcttgattagata-ccatttcaaattgcgaatccggaatgggtgtaat 820 Query: 747 tctactgtcccataaatttatgcaatccacggaagtttcacattgcttgggaagatgaac 806 |||||| |||| |||||||||||||||||| | |||||||||||||| ||||||||||| Sbjct: 821 cctactggcccagaaatttatgcaatccacgaaggtttcacattgctt-ggaagatgaac 879 Query: 807 attcaaatatcagacttctgtgatgctgatcatcggcatattcaacttggaatcattccg 866 |||||||||||||||| |||||||||||||||||||| ||||||||||||| |||| || Sbjct: 880 attcaaatatcagactcttgtgatgctgatcatcggcaaattcaacttggaaacatttcg 939 Query: 867 ggtttgatgcacccgtatgtatc-atggatgttttttcaatgagctccgcaaatgcacca 925 | ||||||||||||||||| ||| ||| ||||| | ||||||||||||||||||||||| Sbjct: 940 gttttgatgcacccgtatg-atcaatgattgtttctccaatgagctccgcaaatgcacca 998 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6970 Number of Sequences: 1807 Number of extensions: 6970 Number of successful extensions: 51 Number of sequences better than 1.0e-20: 1 length of query: 926 length of database: 10,358,551 effective HSP length: 16 effective length of query: 910 effective length of database: 10,329,639 effective search space: 9399971490 effective search space used: 9399971490 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)