BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZH08FM1.SCF screened BAC_end
         (905 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig1790                                                        1493   0.0  

>3x_Contig1790 
          Length = 27369

 Score = 1493 bits (753), Expect = 0.0
 Identities = 798/813 (98%)
 Strand = Plus / Plus

                                                                         
Query: 87    tctctcgcctagttttttttggttgcatgcatacatatcagaaccgcattaaaaaaaaaa 146
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23409 tctctcgcctagttttttttggttgcatgcatacatatcagaaccgcattaaaaaaaaaa 23468

                                                                         
Query: 147   agagaacgcgatcagcatcttttatcaatgagaaggaggatgtaaaataaaattaaggtt 206
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23469 agagaacgcgatcagcatcttttatcaatgagaaggaggatgtaaaataaaattaaggtt 23528

                                                                         
Query: 207   ccttgtcattaagttgatatacacagctgagataaaatgcctatacactgttatgatcca 266
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23529 ccttgtcattaagttgatatacacagctgagataaaatgcctatacactgttatgatcca 23588

                                                                         
Query: 267   acgagaacatctgctgtatggaggatacacacttgatagagggttcaaaagcccctctat 326
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23589 acgagaacatctgctgtatggaggatacacacttgatagagggttcaaaagcccctctat 23648

                                                                         
Query: 327   atataatagagtcggagagggattccactgaagatctaagtaagaatgtgtcatccttga 386
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23649 atataatagagtcggagagggattccactgaagatctaagtaagaatgtgtcatccttga 23708

                                                                         
Query: 387   tatcagataacgaagtacctcaggggaggcaccttggaattttttctactgttattctct 446
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23709 tatcagataacgaagtacctcaggggaggcaccttggaattttttctactgttattctct 23768

                                                                         
Query: 447   ttgtgtcaaggatagttggtggcggtatctattctgttcccagcagtgttttcgtgaatt 506
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23769 ttgtgtcaaggatagttggtggcggtatctattctgttcccagcagtgttttcgtgaatt 23828

                                                                         
Query: 507   gcggtgggaatgtgagcctgtttctattcgtttggttgtgtgctgcagtgatggctttta 566
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23829 gcggtgggaatgtgagcctgtttctattcgtttggttgtgtgctgcagtgatggctttta 23888

                                                                         
Query: 567   tcggtatgtcaatgtttttggagctaggcactatcttgccaaaaagtggcggaagaaaaa 626
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23889 tcggtatgtcaatgtttttggagctaggcactatcttgccaaaaagtggcggaagaaaaa 23948

                                                                         
Query: 627   atttccttgaatttttatacgataagccgccaatgatgacgacagttattttatgcacat 686
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23949 atttccttgaatttttatacgataagccgccaatgatgacgacagttattttatgcacat 24008

                                                                         
Query: 687   attgtctaatgacttgttttgctatgtcgcctgcgatgatattatgaaagtatatattat 746
             |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 24009 attgtctaatgacttgttttgctatgtcgcctgcgatgatattaggaaagtatatattat 24068

                                                                         
Query: 747   acgcccttagttatggtgaagactttgttaacaagaagtcgtatgcttctaactatattg 806
             ||||| |  |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 24069 acgccttaggttatggtgaagactttgttaacaaggagtcgtatgcttctaactatattg 24128

                                                                         
Query: 807   gaatagctgctattatgggtatagagttggggcatgggctctcttctaaccattgcctca 866
             |||||||||||||||||| ||||| ||| | |||||| ||||||  ||||||| ||||||
Sbjct: 24129 gaatagctgctattatggttatagtgtttgtgcatggtctctctcttaaccatggcctca 24188

                                              
Query: 867   tcattcagattattttggggattattaaattgg 899
             ||||||||| ||||||||||||||| |||||||
Sbjct: 24189 tcattcagaatattttggggattataaaattgg 24221


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,593
Number of Sequences: 1807
Number of extensions: 11593
Number of successful extensions: 75
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)