BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZH08FM1.SCF screened BAC_end (905 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1790 1493 0.0 >3x_Contig1790 Length = 27369 Score = 1493 bits (753), Expect = 0.0 Identities = 798/813 (98%) Strand = Plus / Plus Query: 87 tctctcgcctagttttttttggttgcatgcatacatatcagaaccgcattaaaaaaaaaa 146 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23409 tctctcgcctagttttttttggttgcatgcatacatatcagaaccgcattaaaaaaaaaa 23468 Query: 147 agagaacgcgatcagcatcttttatcaatgagaaggaggatgtaaaataaaattaaggtt 206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23469 agagaacgcgatcagcatcttttatcaatgagaaggaggatgtaaaataaaattaaggtt 23528 Query: 207 ccttgtcattaagttgatatacacagctgagataaaatgcctatacactgttatgatcca 266 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23529 ccttgtcattaagttgatatacacagctgagataaaatgcctatacactgttatgatcca 23588 Query: 267 acgagaacatctgctgtatggaggatacacacttgatagagggttcaaaagcccctctat 326 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23589 acgagaacatctgctgtatggaggatacacacttgatagagggttcaaaagcccctctat 23648 Query: 327 atataatagagtcggagagggattccactgaagatctaagtaagaatgtgtcatccttga 386 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23649 atataatagagtcggagagggattccactgaagatctaagtaagaatgtgtcatccttga 23708 Query: 387 tatcagataacgaagtacctcaggggaggcaccttggaattttttctactgttattctct 446 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23709 tatcagataacgaagtacctcaggggaggcaccttggaattttttctactgttattctct 23768 Query: 447 ttgtgtcaaggatagttggtggcggtatctattctgttcccagcagtgttttcgtgaatt 506 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23769 ttgtgtcaaggatagttggtggcggtatctattctgttcccagcagtgttttcgtgaatt 23828 Query: 507 gcggtgggaatgtgagcctgtttctattcgtttggttgtgtgctgcagtgatggctttta 566 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23829 gcggtgggaatgtgagcctgtttctattcgtttggttgtgtgctgcagtgatggctttta 23888 Query: 567 tcggtatgtcaatgtttttggagctaggcactatcttgccaaaaagtggcggaagaaaaa 626 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23889 tcggtatgtcaatgtttttggagctaggcactatcttgccaaaaagtggcggaagaaaaa 23948 Query: 627 atttccttgaatttttatacgataagccgccaatgatgacgacagttattttatgcacat 686 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 23949 atttccttgaatttttatacgataagccgccaatgatgacgacagttattttatgcacat 24008 Query: 687 attgtctaatgacttgttttgctatgtcgcctgcgatgatattatgaaagtatatattat 746 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 24009 attgtctaatgacttgttttgctatgtcgcctgcgatgatattaggaaagtatatattat 24068 Query: 747 acgcccttagttatggtgaagactttgttaacaagaagtcgtatgcttctaactatattg 806 ||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 24069 acgccttaggttatggtgaagactttgttaacaaggagtcgtatgcttctaactatattg 24128 Query: 807 gaatagctgctattatgggtatagagttggggcatgggctctcttctaaccattgcctca 866 |||||||||||||||||| ||||| ||| | |||||| |||||| ||||||| |||||| Sbjct: 24129 gaatagctgctattatggttatagtgtttgtgcatggtctctctcttaaccatggcctca 24188 Query: 867 tcattcagattattttggggattattaaattgg 899 ||||||||| ||||||||||||||| ||||||| Sbjct: 24189 tcattcagaatattttggggattataaaattgg 24221 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,593 Number of Sequences: 1807 Number of extensions: 11593 Number of successful extensions: 75 Number of sequences better than 1.0e-20: 1 length of query: 905 length of database: 10,358,551 effective HSP length: 16 effective length of query: 889 effective length of database: 10,329,639 effective search space: 9183049071 effective search space used: 9183049071 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)