BLASTN 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FJ0AC33ZH10RM1.SCF screened BAC_end
         (919 letters)

Database: Klactis 3X assemblage 11/02 
           1807 sequences; 10,358,551 total letters

Searching....done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

3x_Contig721                                                         1296   0.0  

>3x_Contig721 
          Length = 1977

 Score = 1296 bits (654), Expect = 0.0
 Identities = 759/790 (96%), Gaps = 4/790 (0%)
 Strand = Plus / Minus

                                                                        
Query: 50   gctaaattgttctcggctagtctggacgccatattgagtttatccatcatctccaattca 109
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1774 gctaaattgttctcggctagtctggacgccatattgagtttatccatcatctccaattca 1715

                                                                        
Query: 110  gaatcaaggtccgcatctgtctcatcccctccgtgttttctcaatctgtgggccttcggc 169
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1714 gaatcaaggtccgcatctgtctcatcccctccgtgttttctcaatctgtgggccttcggc 1655

                                                                        
Query: 170  ctcccgttttcattactcatttgtgcttcgagagatttcttgttcacagtacgacggata 229
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1654 ctcccgttttcattactcatttgtgcttcgagagatttcttgttcacagtacgacggata 1595

                                                                        
Query: 230  taaccataaatatacagttcttctcgcacgtcaaaccccaggttcgtaatttggaacagt 289
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1594 taaccataaatatacagttcttctcgcacgtcaaaccccaggttcgtaatttggaacagt 1535

                                                                        
Query: 290  aaattgatcaattttgcgaattcagaagttttaaggtccgtagtcagacctgctgctggc 349
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1534 aaattgatcaattttgcgaattcagaagttttaaggtccgtagtcagacctgctgctggc 1475

                                                                        
Query: 350  tttttttatgcagataaagctcaaagcatgtggttcctttgtacaatcttgatattcttg 409
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1474 tttttttatgcagataaagctcaaagcatgtggttcctttgtacaatcttgatattcttg 1415

                                                                        
Query: 410  ttcctcgaattgtcttacttttcagcattttggaacatgaaaaaggaactgaaattcaaa 469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1414 ttcctcgaattgtcttacttttcagcattttggaacatgaaaaaggaactgaaattcaaa 1355

                                                                        
Query: 470  taataaattccaagtcactgggtgatatgtaaaggtaatttgggacatccagatatttga 529
            ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1354 taataaattccaagtcactgggtgatatgtaaaggtaatttgggacatccagaaatttga 1295

                                                                        
Query: 530  aaggagtaaagctggagcctgtgattgantaattcatttgcttacagagttgattcacag 589
            ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||
Sbjct: 1294 aaggagtaaagctggagcctgtgattgataaattcatttgcttacagagttgattcacag 1235

                                                                        
Query: 590  tcacttcanacctgntactgctgttcgggtttcttctagactggtgaggactatcatatc 649
            |||||||| |||||  |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1234 tcacttcaaacctgtaactgctgttcgggtttcttctagactggtgagaactatcatatc 1175

                                                                        
Query: 650  atanttttagggtttgttctcttacactttgaatacaaaaatattaagtagttgttgata 709
            ||| ||| ||| |||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct: 1174 ataattt-aggttttgttctctcacactttgaatacaaaaataataagtagttgttgata 1116

                                                                        
Query: 710  tacctttaaagagctttgtcagcaactgggactgttgcatcatctcctttaaccct-att 768
            |||||| |||||||| ||||||||||||| ||||||||||||||| || ||| ||| || 
Sbjct: 1115 taccttaaaagagctatgtcagcaactggaactgttgcatcatctactataaaccttata 1056

                                                                        
Query: 769  aagacttttgtcggggcaagcctatttactattccat-tgccttccgctgggaggggggt 827
            |||||| ||||||| ||| |||||||  ||||||||| ||| ||||| || || |||| |
Sbjct: 1055 aagactattgtcggcgcaggcctattagctattccatatgctttccgttgtgatgggg-t 997

                      
Query: 828  tttttttgct 837
            ||||||||||
Sbjct: 996  tttttttgct 987


  Database: Klactis 3X assemblage 11/02
    Posted date:  Nov 27, 2002 12:23 PM
  Number of letters in database: 10,358,551
  Number of sequences in database:  1807
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7602
Number of Sequences: 1807
Number of extensions: 7602
Number of successful extensions: 50
Number of sequences better than 1.0e-20: 1
length of query: 919
length of database: 10,358,551
effective HSP length: 16
effective length of query: 903
effective length of database: 10,329,639
effective search space: 9327664017
effective search space used: 9327664017
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)