BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZH10RM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig721 1296 0.0 >3x_Contig721 Length = 1977 Score = 1296 bits (654), Expect = 0.0 Identities = 759/790 (96%), Gaps = 4/790 (0%) Strand = Plus / Minus Query: 50 gctaaattgttctcggctagtctggacgccatattgagtttatccatcatctccaattca 109 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1774 gctaaattgttctcggctagtctggacgccatattgagtttatccatcatctccaattca 1715 Query: 110 gaatcaaggtccgcatctgtctcatcccctccgtgttttctcaatctgtgggccttcggc 169 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1714 gaatcaaggtccgcatctgtctcatcccctccgtgttttctcaatctgtgggccttcggc 1655 Query: 170 ctcccgttttcattactcatttgtgcttcgagagatttcttgttcacagtacgacggata 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1654 ctcccgttttcattactcatttgtgcttcgagagatttcttgttcacagtacgacggata 1595 Query: 230 taaccataaatatacagttcttctcgcacgtcaaaccccaggttcgtaatttggaacagt 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1594 taaccataaatatacagttcttctcgcacgtcaaaccccaggttcgtaatttggaacagt 1535 Query: 290 aaattgatcaattttgcgaattcagaagttttaaggtccgtagtcagacctgctgctggc 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1534 aaattgatcaattttgcgaattcagaagttttaaggtccgtagtcagacctgctgctggc 1475 Query: 350 tttttttatgcagataaagctcaaagcatgtggttcctttgtacaatcttgatattcttg 409 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1474 tttttttatgcagataaagctcaaagcatgtggttcctttgtacaatcttgatattcttg 1415 Query: 410 ttcctcgaattgtcttacttttcagcattttggaacatgaaaaaggaactgaaattcaaa 469 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1414 ttcctcgaattgtcttacttttcagcattttggaacatgaaaaaggaactgaaattcaaa 1355 Query: 470 taataaattccaagtcactgggtgatatgtaaaggtaatttgggacatccagatatttga 529 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 1354 taataaattccaagtcactgggtgatatgtaaaggtaatttgggacatccagaaatttga 1295 Query: 530 aaggagtaaagctggagcctgtgattgantaattcatttgcttacagagttgattcacag 589 |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1294 aaggagtaaagctggagcctgtgattgataaattcatttgcttacagagttgattcacag 1235 Query: 590 tcacttcanacctgntactgctgttcgggtttcttctagactggtgaggactatcatatc 649 |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 1234 tcacttcaaacctgtaactgctgttcgggtttcttctagactggtgagaactatcatatc 1175 Query: 650 atanttttagggtttgttctcttacactttgaatacaaaaatattaagtagttgttgata 709 ||| ||| ||| |||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct: 1174 ataattt-aggttttgttctctcacactttgaatacaaaaataataagtagttgttgata 1116 Query: 710 tacctttaaagagctttgtcagcaactgggactgttgcatcatctcctttaaccct-att 768 |||||| |||||||| ||||||||||||| ||||||||||||||| || ||| ||| || Sbjct: 1115 taccttaaaagagctatgtcagcaactggaactgttgcatcatctactataaaccttata 1056 Query: 769 aagacttttgtcggggcaagcctatttactattccat-tgccttccgctgggaggggggt 827 |||||| ||||||| ||| ||||||| ||||||||| ||| ||||| || || |||| | Sbjct: 1055 aagactattgtcggcgcaggcctattagctattccatatgctttccgttgtgatgggg-t 997 Query: 828 tttttttgct 837 |||||||||| Sbjct: 996 tttttttgct 987 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7602 Number of Sequences: 1807 Number of extensions: 7602 Number of successful extensions: 50 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)