BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZH11FM1.SCF screened BAC_end (912 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1496 1322 0.0 >3x_Contig1496 Length = 9544 Score = 1322 bits (667), Expect = 0.0 Identities = 713/723 (98%), Gaps = 4/723 (0%) Strand = Plus / Minus Query: 86 tgctagtagttcttcatcagataagtttgaattgccgaaataaagagaacctctagcata 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3477 tgctagtagttcttcatcagataagtttgaattgccgaaataaagagaacctctagcata 3418 Query: 146 tgatattaaactctttgcattaaattgagactcgtcaagcggaattgatttgttggcata 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3417 tgatattaaactctttgcattaaattgagactcgtcaagcggaattgatttgttggcata 3358 Query: 206 tatcaacgcacatttcccatcaaaagtaacaaactttataaacttgaaccagataatatc 265 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3357 tatcaacgcacatttcccatcaaaagtaacaaactttataaacttgaaccagataatatc 3298 Query: 266 ttgaactatttttggaagagcgaaccgcaatagattaataaatatcggtggatatctcat 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3297 ttgaactatttttggaagagcgaaccgcaatagattaataaatatcggtggatatctcat 3238 Query: 326 ccatacacatttcttcgtatcatttatgaaggaatcattctcttgtactttaccatatga 385 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 3237 ccatacacatttcttcgtatcatttaggaaggaatcattctcttgtactttaccatatga 3178 Query: 386 ttcttctaattcttctgggttatcttctgattgtaccgctgggtgaattctgctataatc 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3177 ttcttctaattcttctgggttatcttctgattgtaccgctgggtgaattctgctataatc 3118 Query: 446 ttcagctgatttctgttcgatataatcgttgcaggagcgaaaggaaacgattggggtctt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3117 ttcagctgatttctgttcgatataatcgttgcaggagcgaaaggaaacgattggggtctt 3058 Query: 506 gttcaagctagaagagtgagctggaatattcccagacgctagctcaataagggtgataac 565 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3057 gttcaagctagaagagtgagctggaatattcccagacgctagctcaataagggtgataac 2998 Query: 566 atctagaagccggaacatgctctggaaacagagcatgatagataaagcttcaaaggaaga 625 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 2997 atctagaagccggaacatgctctggaaacagagcatgatagaaaaagcttcaaaggaaga 2938 Query: 626 tatctcagaatctacagcctcacttaattcggccacgtcgacaagtcttaattctgaatc 685 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2937 tatctcagaatctacagcctcacttaattcggccacgtcgacaagtcttaattctgaatc 2878 Query: 686 gaatacgtcacatatcaaaatatccaactgattaatattgttctcgtaggttaatcttaa 745 ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 2877 gaatacgtcacatatcaaaatatccaacttattaatatt-ttctcgtaggttaatcttaa 2819 Query: 746 gtgggttgtgacaacgctaagcagttttataacgttccaatccacaactatacagtcttt 805 || | ||||||||||||||||||| |||| ||||| |||||||||||||| ||||||||| Sbjct: 2818 gt-gtttgtgacaacgctaagcag-tttagaacgtcccaatccacaacta-acagtcttt 2762 Query: 806 ttt 808 ||| Sbjct: 2761 ttt 2759 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6697 Number of Sequences: 1807 Number of extensions: 6697 Number of successful extensions: 72 Number of sequences better than 1.0e-20: 1 length of query: 912 length of database: 10,358,551 effective HSP length: 16 effective length of query: 896 effective length of database: 10,329,639 effective search space: 9255356544 effective search space used: 9255356544 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)