BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC33ZH11RM1.SCF screened BAC_end (921 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig868 1306 0.0 >3x_Contig868 Length = 3693 Score = 1306 bits (659), Expect = 0.0 Identities = 694/703 (98%), Gaps = 2/703 (0%) Strand = Plus / Plus Query: 49 tattcttgtgtaatcgacctatctgatcttaacttttaaatatccattcgcttctggatt 108 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2621 tattcttgtgtaatcgacctatctgatcttaacttttaaatatccattcgcttctggatt 2680 Query: 109 ttcattttttgatctttttcatatatagatttgttactgacaaccgaagtgcagatgtaa 168 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2681 ttcattttttgatctttttcatatatagatttgttactgacaaccgaagtgcagatgtaa 2740 Query: 169 gtcatatctgaactggaatagtattacgtggaaaattatggcaaataccgatactgacgg 228 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2741 gtcatatctgaactggaatagtattacgtggaaaattatggcaaataccgatactgacgg 2800 Query: 229 agggaaaacacgatagaaaattgacctcattagatcaattctaacttgggcaccaatctg 288 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2801 agggaaaacacgatagaaaattgacctcattagatcaattctaacttgggcaccaatctg 2860 Query: 289 tatattcagcatcatattaaccgtcggatgaatgacatataacagtgattaggtgagtga 348 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2861 tatattcagcatcatattaaccgtcggatgaatgacatataacagtgattaggtgagtga 2920 Query: 349 cgataaaacctgtagcaaatgcggaagagtacttctaagtgtaaatatattataatacag 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2921 cgataaaacctgtagcaaatgcggaagagtacttctaagtgtaaatatattataatacag 2980 Query: 409 taaataataaaagatcatctgtttttgttttctggctaaaattcggttgcattctcaatg 468 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2981 taaataataaaagatcatctgtttttgttttctggctaaaattcggttgcattctcaatg 3040 Query: 469 gttatgtctcttgcatactgagaacctcctctagtgtccttcgcagctgcagtatcttct 528 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3041 gttatgtctcttgcatactgagaacctcctctagtgtccttcgcagctgcagtatcttct 3100 Query: 529 tcggcgtcacctttgtcctccgcatcgcgaggaacgtgattgagttgaacgcttggggca 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3101 tcggcgtcacctttgtcctccgcatcgcgaggaacgtgattgagttgaacgcttggggca 3160 Query: 589 tatttagtatgctctagattgctgaaaatattaagtagcactttatccaaatactccggt 648 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3161 tatttagtatgctctagattgctgaaaatattaagtagcactttatccaaatactccggt 3220 Query: 649 gtattgacgttatacatattatgatggtctgacatccattttgtattcaaggccatatta 708 ||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||| || Sbjct: 3221 gtattgacgttatacatatta-gatggtctgacatccaatttgtaatcagggccataata 3279 Query: 709 ttcgtagtaatcgttgtaaagaaatttcttcatcccaaatcac 751 ||||||||||||||||| ||| || |||||||||| ||||||| Sbjct: 3280 ttcgtagtaatcgttgt-aaggaagttcttcatccaaaatcac 3321 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7162 Number of Sequences: 1807 Number of extensions: 7162 Number of successful extensions: 42 Number of sequences better than 1.0e-20: 1 length of query: 921 length of database: 10,358,551 effective HSP length: 16 effective length of query: 905 effective length of database: 10,329,639 effective search space: 9348323295 effective search space used: 9348323295 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)