BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZA02FM1.SCF screened BAC_end (919 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1608 833 0.0 >3x_Contig1608 Length = 13037 Score = 833 bits (420), Expect = 0.0 Identities = 524/551 (95%), Gaps = 7/551 (1%) Strand = Plus / Plus Query: 86 cttcttcttcttcatcttcttcttctttccttttatcatcttcatcacttgctattttat 145 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 98 cttcttcttcttcatcttcttcttctttccgtttatcatcttcatcacttgctattttat 157 Query: 146 tctcaactaaagcagaattcct-caaattggtattggcgaactttttgataggacccttc 204 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 158 tctcaactaaagcagaattccttcaaattggtattggcgaactttttgataggacccttc 217 Query: 205 ttgggtacttcgattttgtcgtttgcctctaaatttgactgttggtgctctatcacctct 264 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 218 ttgggtacctcgattttgtcgtttgcctctaaatttgactgttggtgctctatcacctct 277 Query: 265 tcc-tcttcttcttcttcctcatcatcataattgatcttgcttgattttgtaacatccac 323 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 tccctcttcttcttcttcctcatcatcataattgatcttgcttgattttgtaacatccac 337 Query: 324 gtatggcggttgcgcttgattaaaaccataccagctctgttgatactggtgcggattcgg 383 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 gtatggcggttgcgcttgattaaaaccataccagctctgttgatactggtgcggattcgg 397 Query: 384 atagaaaggatggtgggtcccatatctcattcccattggtgcatgctgcatagcggggac 443 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 398 atagaaaggatggtgggtcccatatctcattcccattggtgcatgctgcatagcggggac 457 Query: 444 accgtattggttgggttgattcatctgaggtatcggataatactgcattcccgtggtttg 503 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 458 accgtattggttgggttgattcatctgaggtatcggataatactgcattcgcgtggtttg 517 Query: 504 taaccgtttgtgccaaa--aatattattcacagattccgcctgtgaagagttattgtacc 561 ||| ||| ||| |||| | |||||||||||||| | |||||||||||||||||||| Sbjct: 518 taa-cgtatgttgcaaaagattattattcacagatccgccctgtgaagagttattgtaca 576 Query: 562 ctttttgaccatttatgttgcttcgattctctttcccttgggcccttctttcccatcatt 621 | ||||||||||| |||||||| || ||| |||||| ||||| ||| |||||||||| Sbjct: 577 cgttttgaccattcatgttgctcgaatactc-ttccctggggcctttc-ttcccatcata 634 Query: 622 ttcattaattg 632 ||||||||||| Sbjct: 635 ttcattaattg 645 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 11,250 Number of Sequences: 1807 Number of extensions: 11250 Number of successful extensions: 690 Number of sequences better than 1.0e-20: 1 length of query: 919 length of database: 10,358,551 effective HSP length: 16 effective length of query: 903 effective length of database: 10,329,639 effective search space: 9327664017 effective search space used: 9327664017 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)