BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZA08RM1.SCF screened BAC_end (984 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1380 1168 0.0 >3x_Contig1380 Length = 6718 Score = 1168 bits (589), Expect = 0.0 Identities = 614/621 (98%), Gaps = 1/621 (0%) Strand = Plus / Plus Query: 48 cgcaagtcctcgatctcaaagaaaatcggcagaaattgctgatttatgcgaacagacagc 107 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5184 cgcaagtcctcgatctcaaagaaaatcggcagaaattgctgatttatgcgaacagacagc 5243 Query: 108 agaagaactcaagggcttaatacttgagctaacttcaaacaataaaaaggaaccgggaac 167 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5244 agaagaactcaagggcttaatacttgagctaacttcaaacaataaaaaggaaccgggaac 5303 Query: 168 tatatctaagtcaaaatccttgccaccactcccacgacctttgctcaatggacaaaagaa 227 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5304 tatatctaagtcaaaatccttgccaccactcccacgacctttgctcaatggacaaaagaa 5363 Query: 228 tgcactgcgccataataaaatgtctcctgaaaagcagagaagatatatggagagaataca 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5364 tgcactgcgccataataaaatgtctcctgaaaagcagagaagatatatggagagaataca 5423 Query: 288 ggggatacaacactaacacaataacatatatattattctagttagttaatatccggctat 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5424 ggggatacaacactaacacaataacatatatattattctagttagttaatatccggctat 5483 Query: 348 gagatggtacggtatgtaatattacagattgtctttttaaatgtcctgtttataatatct 407 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5484 gagatggtacggtatgtaatattacagattgtctttttaaatgtcctgtttataatatct 5543 Query: 408 tgggagatgcgtctgatgaggtcgtagattcctgaattgggctgagggaagaattctgtg 467 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5544 tgggagatgcgtctgatgaggtcgtagattcctgaattgggctgagggaagaattctgtg 5603 Query: 468 taaagcttggagaaggcttcgtgaatgagctgttgggggtaacaggtgaagcaagagttt 527 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5604 taaagcttggagaaggcttcgtgaatgagctgttgggggtaacaggtgaagcaagagttt 5663 Query: 528 tgttatcgagtattcggtcctcgcaattatcttcagactttcggggttcatggagtaatg 587 ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 5664 tgttatcgagtattcggtcctcgcaattatcttcagactttcgggaatcatggagtaatg 5723 Query: 588 atgaactgaaaggttcaaaatttgacctatgaattgaattatgatccaaaaatgggactg 647 ||||||||||||||||| ||| |||||||||||||||||||||||| ||||||| ||||| Sbjct: 5724 atgaactgaaaggttcagaatatgacctatgaattgaattatgatcaaaaaatgtgactg 5783 Query: 648 tntttattttttatttccaac 668 | ||||||||||||||||||| Sbjct: 5784 t-tttattttttatttccaac 5803 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 14,839 Number of Sequences: 1807 Number of extensions: 14839 Number of successful extensions: 168 Number of sequences better than 1.0e-20: 1 length of query: 984 length of database: 10,358,551 effective HSP length: 16 effective length of query: 968 effective length of database: 10,329,639 effective search space: 9999090552 effective search space used: 9999090552 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 51 (101.6 bits)