BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZA12FM1.SCF screened BAC_end (894 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1735 920 0.0 >3x_Contig1735 Length = 19486 Score = 920 bits (464), Expect = 0.0 Identities = 492/500 (98%), Gaps = 1/500 (0%) Strand = Plus / Minus Query: 86 agataatctggcttctgtgtatatatagttacgtaacgagcttctaatggaattatcgac 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18466 agataatctggcttctgtgtatatatagttacgtaacgagcttctaatggaattatcgac 18407 Query: 146 aggttcgatcggtcccaaaacaatagacaggacagcgttgttccatgaatacaactagga 205 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18406 aggttcgatcggtcccaaaacaatagacaggacagcgttgttccatgaatacaactagga 18347 Query: 206 tgcgtacattccttttcgattgcttcgtttttaagatcagtatttgcattttgtttctaa 265 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18346 tgcgtacattcctcttcgattgcttcgtttttaagatcagtatttgcattttgtttctaa 18287 Query: 266 acataatgcatatatcatgggatttggtaatacagtgcgtttcggtagaatttaccccag 325 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18286 acataatgcatatatcatgggatttggtaatacagtgcgtttcggtagaatttaccccag 18227 Query: 326 tgaatccattttgcgcagttttcgtcaaaccttttcgccagaagttcgtaatcagtaccg 385 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18226 tgaatccattttgcgcagttttcgtcaaaccttttcgccagaagttcgtaatcagtaccg 18167 Query: 386 taattgccataaaactcaataaagaagcaatattgccattttctttctgattgcacttga 445 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18166 taattgccataaaactcaataaagaagcaatattgccattttctttctgattgcacttga 18107 Query: 446 ttatggaatggtctcgaactgattgagcacatattcaacttatactccctcaagacattt 505 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 18106 ttatggaatggtctcgaactgattgagcacatattcaacttatactccctcaagacattt 18047 Query: 506 aatacatctattaaggaaccctggatcatcttgatttatcacgaaagggacaaagtttac 565 |||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||| Sbjct: 18046 aatacatctattaaggaa-cctggatcatcttgatttatcacgaaggtgacaaagtttac 17988 Query: 566 tttattttaatcgcttttag 585 ||| ||| ||||| ||||| Sbjct: 17987 tttcatttcatcgcctttag 17968 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,473 Number of Sequences: 1807 Number of extensions: 13473 Number of successful extensions: 109 Number of sequences better than 1.0e-20: 1 length of query: 894 length of database: 10,358,551 effective HSP length: 16 effective length of query: 878 effective length of database: 10,329,639 effective search space: 9069423042 effective search space used: 9069423042 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)