BLASTN 2.2.3 [May-13-2002] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FJ0AC34ZA12RM1.SCF screened BAC_end (924 letters) Database: Klactis 3X assemblage 11/02 1807 sequences; 10,358,551 total letters Searching....done Score E Sequences producing significant alignments: (bits) Value 3x_Contig1749 1035 0.0 >3x_Contig1749 Length = 22923 Score = 1035 bits (522), Expect = 0.0 Identities = 642/674 (95%), Gaps = 6/674 (0%) Strand = Plus / Plus Query: 45 cttcgtaccaatatcccattgtctctgcagtggtaagcatatgtttcgaaagtaagtaat 104 ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 21228 cttcgtaccaa-atcccattg-ctctgcagtggtaagcatatgtttcgaaagtaagtaat 21285 Query: 105 caaatgcctcgtaatttttaacgtcaacttgcactgcttctttaaagcattctttggcct 164 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21286 caaatgcctcgtaatttttaacgtcaacttgcactgcttctttaaagcattctttggcct 21345 Query: 165 gttccatgttactaagggagacgtatattctgcctcttaacaaacacattgtattatttt 224 ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 21346 gttccatgttactaagggagacgtatattctgcctcttaacaaacacattg-acgattcg 21404 Query: 225 agctttacaccaccatctgcattccctggagaggacggttcactttgaaacgggttcgtg 284 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21405 agctttacaccaccatctgcattccctggagaggacggttcactttgaaacgggttcgtg 21464 Query: 285 tctccgatgatatcaagtgcctcttcaagtttgtttaatttgaaaagacataatgctgcc 344 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21465 tctccgatgatatcaagtgcctcttcaagtttgtttaatttgaaaagacataatgctgcc 21524 Query: 345 aagtagcggcacattatgctttccgaatccaattgatccgtaaatattagttccacggct 404 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21525 aagtagcggcacattatgctttccgaatccaattgatccgtaaatattagttccacggct 21584 Query: 405 cgcacgtaagatccttgattgtaatacacttgtgccaaccaaaaggcatcgttgggatcc 464 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21585 cgcacgtaagatccttgattgtaatacacttgtgccaaccaaaaggcatcgttgggatcc 21644 Query: 465 tttgtcattgaatagatgagatcaccgatgtgttcggcagttttataatggtgttgcatc 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 21645 tttgtcattgaatagatgagatcaccgatgtgttcggcagttttataatggtgttgcatc 21704 Query: 525 aaagcatcgtgccttccaagccgtagtttctctacagatgaaagatcgcctacatcgaat 584 || ||||||||||| | |||||||||||||||||||||||||||||||| ||||||||| Sbjct: 21705 aaggcatcgtgcctccaaagccgtagtttctctacagatgaaagatcgctaacatcgaat 21764 Query: 585 acataatcgctggcatggtctatatcttcgtcattcctagaaattgttaactcaacaagg 644 |||| ||||||||||||||||||||||||||||||| ||||| | ||| ||||||| | Sbjct: 21765 acattatcgctggcatggtctatatcttcgtcattcgtagaattgtttagctcaacagtg 21824 Query: 645 ttcgtccgatgtaccattttttcttaaa-tagaacggcaatgccggtcccaataaaccct 703 | ||| |||||||| | ||||||||||| ||| |||||| ||||||||| ||||| || | Sbjct: 21825 tccgt-cgatgtactagtttttcttaaagtag-acggcagtgccggtccaaataatccat 21882 Query: 704 tttttggcatcgac 717 | |||| ||||||| Sbjct: 21883 tctttgtcatcgac 21896 Database: Klactis 3X assemblage 11/02 Posted date: Nov 27, 2002 12:23 PM Number of letters in database: 10,358,551 Number of sequences in database: 1807 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7999 Number of Sequences: 1807 Number of extensions: 7999 Number of successful extensions: 57 Number of sequences better than 1.0e-20: 1 length of query: 924 length of database: 10,358,551 effective HSP length: 16 effective length of query: 908 effective length of database: 10,329,639 effective search space: 9379312212 effective search space used: 9379312212 T: 0 A: 40 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 50 (99.6 bits)